MicL, a new σE-dependent sRNA, combats envelope stress by repressing synthesis of Lpp, the major outer membrane lipoprotein (Q28244052)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Carol A Gross

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Taylor B Updegrove

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Emily B Gogol

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Svetlana A Shabalina

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

language of work or name

English

0 references

publication date

15 July 2014

0 references

number of pages

1 reference

inferred from page(s)

published in

Genes & Development

1 reference

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12 June 2020

volume

1 reference

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12 June 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

page(s)

1620-1634

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

12 June 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4102768/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon

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The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli

20 March 2017

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MicA sRNA links the PhoP regulon to cell envelope stress

20 March 2017

1 reference

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Crystal structure of human copper homeostasis protein CutC reveals a potential copper-binding site

20 March 2017

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A genetic approach for finding small RNAs regulators of genes of interest identifies RybC as regulating the DpiA/DpiB two-component system

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20 March 2017

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SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay

20 March 2017

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Sigma E controls biogenesis of the antisense RNA MicA

20 March 2017

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Hfq modulates the sigmaE-mediated envelope stress response and the sigma32-mediated cytoplasmic stress response in Escherichia coli

20 March 2017

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Conserved small non-coding RNAs that belong to the sigmaE regulon: role in down-regulation of outer membrane proteins

20 March 2017

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Remodelling of the Escherichia coli outer membrane by two small regulatory RNAs

20 March 2017

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Conserved and variable functions of the sigmaE stress response in related genomes

20 March 2017

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Hfq-dependent regulation of OmpA synthesis is mediated by an antisense RNA.

20 March 2017

1 reference

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Global analysis of small RNA and mRNA targets of Hfq

20 March 2017

1 reference

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Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli

20 March 2017

1 reference

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Conserved protein YecM fromEscherichia coli shows structural homology to metal-binding isomerases and oxygenases

20 March 2017

1 reference

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

20 March 2017

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Identification of cutC and cutF (nlpE) genes involved in copper tolerance in Escherichia coli

20 March 2017

1 reference

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A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA)

20 March 2017

1 reference

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Site-directed mutagenesis by overlap extension using the polymerase chain reaction

20 March 2017

1 reference

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Control of Pseudomonas aeruginosa AlgW protease cleavage of MucA by peptide signals and MucB

20 March 2017

1 reference

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Hfq and its constellation of RNA

20 March 2017

1 reference

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Functional roles for noise in genetic circuits

7 April 2017

1 reference

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Molecular basis of bacterial outer membrane permeability revisited

7 April 2017

1 reference

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An efficient recombination system for chromosome engineering in Escherichia coli

7 April 2017

1 reference

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Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant

7 April 2017

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Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources

7 April 2017

1 reference

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Inverse regulation of Fe- and Ni-containing SOD genes by a Fur family regulator Nur through small RNA processed from 3'UTR of the sodF mRNA

29 September 2017

1 reference

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On the essentiality of lipopolysaccharide to Gram-negative bacteria

29 September 2017

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Regulated proteolysis: control of the Escherichia coli σ(E)-dependent cell envelope stress response

29 September 2017

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Microbe-host interactions: structure and role of Gram-negative bacterial porins

29 September 2017

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New insights into small RNA-dependent translational regulation in prokaryotes

29 September 2017

1 reference

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An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs

29 September 2017

1 reference

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The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria

29 September 2017

1 reference

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Multiple factors dictate target selection by Hfq-binding small RNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Predicting the strength of UP-elements and full-length E. coli σE promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Selective ribosome profiling reveals the cotranslational chaperone action of trigger factor in vivo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Outer membrane lipoprotein Lpp is Gram-negative bacterial cell surface receptor for cationic antimicrobial peptides

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

The Bam machine: a molecular cooper

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Signal integration by DegS and RseB governs the σ E-mediated envelope stress response in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Phenotypic landscape of a bacterial cell

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

RNase III participates in GadY-dependent cleavage of the gadX-gadW mRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

The bacterial cell envelope

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Promoter strength properties of the complete sigma E regulon of Escherichia coli and Salmonella enterica

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

The extracytoplasmic stress factor, sigmaE, is required to maintain cell envelope integrity in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Comparison of approaches for rational siRNA design leading to a new efficient and transparent method

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

SigmaE regulates and is regulated by a small RNA in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Design principles of the proteolytic cascade governing the sigmaE-mediated envelope stress response in Escherichia coli: keys to graded, buffered, and rapid signal transduction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

An antibody-based microarray assay for small RNA detection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

OMP peptide signals initiate the envelope-stress response by activating DegS protease via relief of inhibition mediated by its PDZ domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

The Escherichia coli sigma(E)-dependent extracytoplasmic stress response is controlled by the regulated proteolysis of an anti-sigma factor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

SigmaE is an essential sigma factor in Escherichia coli.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Lethality of the covalent linkage between mislocalized major outer membrane lipoprotein and the peptidoglycan of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Development of an in vitro mRNA decay system for Escherichia coli: poly(A) polymerase I is necessary to trigger degradation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Plasmid-controlled resistance to copper in Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

On the process of cellular division in Escherichia coli: a mutant of E. coli lacking a murein-lipoprotein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Murein-lipoprotein of Escherichia coli: A protein involved in the stabilization of bacterial cell envelope

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Dual molecular signals mediate the bacterial response to outer-membrane stress

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

The free and bound forms of Lpp occupy distinct subcellular locations in Escherichia coli

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Growth phase-dependent regulation of the extracytoplasmic stress factor, sigmaE, by guanosine 3',5'-bispyrophosphate (ppGpp).

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

The activity of sigma E, an Escherichia coli heat-inducible sigma-factor, is modulated by expression of outer membrane proteins.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Chemical Characterization, Spatial Distribution and Function of a Lipoprotein (Murein-Lipoprotein) of the E. coli Cell Wall. The Specific Effect of Trypsin on the Membrane Structure

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Biogenesis and Membrane Targeting of Lipoproteins.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Down-regulation of outer membrane proteins by noncoding RNAs: unraveling the cAMP-CRP- and sigmaE-dependent CyaR-ompX regulatory case.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Identification of the sigmaE regulon of Salmonella enterica serovar Typhimurium

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Regulation of ompA mRNA stability: the role of a small regulatory RNA in growth phase-dependent control.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Identification of a Multicomponent Complex Required for Outer Membrane Biogenesis in Escherichia coli

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Mini-λ: a tractable system for chromosome and BAC engineering

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Characterization of a temperature-sensitive mutant of Salmonella typhimurium defective in apolipoprotein N-acyltransferase.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4102768

Growth-rate dependent regulation of mRNA stability in Escherichia coli

27 November 2018

1 reference

12 December 2020

Imp/OstA is required for cell envelope biogenesis in Escherichia coli

1 reference

12 December 2020

The Assembly of a Structural Lipoprotein in the Envelope of Escherichia coli

1 reference

12 December 2020

Analysis of the small RNA spf in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000

1 reference

12 December 2020

Identifiers

DOI

10.1101/GAD.243485.114

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

release_wq7l5tq45ffujbkkilcbpoq56y

12 June 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/wq7l5tq45ffujbkkilcbpoq56y

24 November 2022

mapped directly with Wikidata item

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

PubMed publication ID

25030700

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25030700%20AND%20SRC:MED&resulttype=core&format=json