Metabolic modeling with Big Data and the gut microbiome (Q28078364)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

review article

1 reference

title

Metabolic modeling with Big Data and the gut microbiome (English)

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

1 reference

0 references

1 reference

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24 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

Vanessa Hale

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

Nicholas Chia

2 references

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24 March 2020

Annette C Merkel

series ordinal

1 reference

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24 March 2020

language of work or name

1 reference

5 February 2016

2 references

PubMed

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

Applied & translational genomics

24 March 2020

published in

2 references

Crossref

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24 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

page(s)

10-15

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Data-driven integration of genome-scale regulatory and metabolic network models

24 March 2020

cites work

1 reference

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20 March 2017

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Diet rapidly and reproducibly alters the human gut microbiome

20 March 2017

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The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota

7 April 2017

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Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

7 April 2017

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The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice

7 April 2017

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Impact of demographics on human gut microbial diversity in a US Midwest population

7 April 2017

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Phenotypic differentiation of gastrointestinal microbes is reflected in their encoded metabolic repertoires

29 September 2017

1 reference

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Collecting Fecal Samples for Microbiome Analyses in Epidemiology Studies

29 September 2017

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Microbiology: Create a global microbiome effort

29 September 2017

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MICROBIOME. A unified initiative to harness Earth's microbiomes

29 September 2017

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Draft genome sequences of 24 microbial strains assembled from direct sequencing from 4 stool samples

29 September 2017

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NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation

29 September 2017

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Metabolic dependencies drive species co-occurrence in diverse microbial communities

29 September 2017

1 reference

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Sequencing and beyond: integrating molecular 'omics' for microbial community profiling

29 September 2017

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Systematic prediction of health-relevant human-microbial co-metabolism through a computational framework

29 September 2017

1 reference

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How informative is the mouse for human gut microbiota research?

29 September 2017

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29 September 2017

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Likelihood-based gene annotations for gap filling and quality assessment in genome-scale metabolic models

29 September 2017

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The gut microbiota, bacterial metabolites and colorectal cancer

29 September 2017

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Reconstruction of insulin signal flow from phosphoproteome and metabolome data

29 September 2017

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Pancreatic cancer, inflammation, and microbiome

29 September 2017

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Relating the metatranscriptome and metagenome of the human gut.

29 September 2017

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Gut microbiota-generated metabolites in animal health and disease

29 September 2017

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Emerging roles of the microbiome in cancer

29 September 2017

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The gut microbiome modulates colon tumorigenesis

29 September 2017

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Stool microbiome and metabolome differences between colorectal cancer patients and healthy adults

29 September 2017

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Predicting and manipulating cardiac drug inactivation by the human gut bacterium Eggerthella lenta

29 September 2017

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Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease

29 September 2017

1 reference

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Conserved shifts in the gut microbiota due to gastric bypass reduce host weight and adiposity

29 September 2017

1 reference

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Complex interactions among diet, gastrointestinal transit, and gut microbiota in humanized mice

29 September 2017

1 reference

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Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease

29 September 2017

1 reference

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Systems-level characterization of a host-microbe metabolic symbiosis in the mammalian gut

29 September 2017

1 reference

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Role of the intestinal microbiome in health and disease: from correlation to causation

29 September 2017

1 reference

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Improving metabolic flux predictions using absolute gene expression data

29 September 2017

1 reference

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Computational systems biology and in silico modeling of the human microbiome

29 September 2017

1 reference

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The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins

29 September 2017

1 reference

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The impact of the microbiota on the pathogenesis of IBD: lessons from mouse infection models

29 September 2017

1 reference

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iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations

29 September 2017

1 reference

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The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli

29 September 2017

1 reference

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Network thinking in ecology and evolution.

29 September 2017

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Towards multidimensional genome annotation

29 September 2017

1 reference

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The Human Genome Project: Lessons from Large-Scale Biology

29 September 2017

1 reference

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Introduction to sample size determination and power analysis for clinical trials

29 September 2017

1 reference

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A practical approach to significance assessment in alignment with gaps.

2 June 2018

1 reference

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10.1016/J.ATG.2016.02.001

27 November 2018

Identifiers

DOI

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3700604

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

OpenCitations bibliographic resource ID

24 March 2020

3700604

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

PubMed publication ID

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27668170%20AND%20SRC:MED&resulttype=core&format=json