A U5 small nuclear ribonucleoprotein particle protein involved only in the second step of pre-mRNA splicing in Saccharomyces cerevisiae (Q27930011)

1 December 2016

title

A U5 small nuclear ribonucleoprotein particle protein involved only in the second step of pre-mRNA splicing in Saccharomyces cerevisiae (English)

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MRNA splicing protein PRP18 YGR006W

1 December 2016

main subject

Saccharomyces cerevisiae

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ribonucleoprotein complex

GOA release 2020-03-11

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J Abelson

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D S Horowitz

series ordinal

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language of work or name

English

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publication date

May 1993

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published in

Molecular and Cellular Biology

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A comprehensive set of sequence analysis programs for the VAX

1 December 2016

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2959-70

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cites work

1 reference

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Evidence for the existence of snRNAs U4 and U6 in a single ribonucleoprotein complex and for their association by intermolecular base pairing

20 March 2017

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Molecular cloning and characterization of the gene encoding cholinephosphate cytidylyltransferase in Saccharomyces cerevisiae

20 March 2017

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U5 small nuclear ribonucleoprotein: RNA structure analysis and ATP-dependent interaction with U4/U6

20 March 2017

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20S small nuclear ribonucleoprotein U5 shows a surprisingly complex protein composition

20 March 2017

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The mammalian analogue of the yeast PRP8 splicing protein is present in the U4/5/6 small nuclear ribonucleoprotein particle and the spliceosome

20 March 2017

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20 March 2017

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The yeast PRP6 gene encodes a U4/U6 small nuclear ribonucleoprotein particle (snRNP) protein, and the PRP9 gene encodes a protein required for U2 snRNP binding

20 March 2017

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U4 small nuclear RNA dissociates from a yeast spliceosome and does not participate in the subsequent splicing reaction

20 March 2017

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20 March 2017

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Spliceosome assembly in yeast

20 March 2017

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Suppressors of a U4 snRNA mutation define a novel U6 snRNP protein with RNA-binding motifs

20 March 2017

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Cloning and expression of rat liver CTP: phosphocholine cytidylyltransferase: an amphipathic protein that controls phosphatidylcholine synthesis

20 March 2017

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Yeast mRNA splicing in vitro

20 March 2017

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Interactions between small nuclear ribonucleoprotein particles in formation of spliceosomes

7 April 2017

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Isolation and characterization of pre-mRNA splicing mutants of Saccharomyces cerevisiae

7 April 2017

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Messenger RNA Splicing in Yeast: Clues to Why the Spliceosome Is a Ribonucleoprotein

7 April 2017

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D-E-A-D protein family of putative RNA helicases

7 April 2017

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[12] One-step gene disruption in yeast

7 April 2017

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U4 and U6 RNAs coexist in a single small nuclear ribonucleoprotein particle

29 September 2017

1 reference

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RNA11 protein is associated with the yeast spliceosome and is localized in the periphery of the cell nucleus

29 September 2017

1 reference

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Nucleotide sequence and transcriptional mapping of the yeast pet56-his3-ded1 gene region

29 September 2017

1 reference

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An ordered pathway of snRNP binding during mammalian pre-mRNA splicing complex assembly

29 September 2017

1 reference

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The 3' splice site of pre-messenger RNA is recognized by a small nuclear ribonucleoprotein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Cloning of the RNA8 gene of Saccharomyces cerevisiae, detection of the RNA8 protein, and demonstration that it is essential for nuclear pre-mRNA splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Conservation between yeast and man of a protein associated with U5 small nuclear ribonucleoprotein

29 September 2017

1 reference

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Evidence from complementation assays in vitro that U5 snRNP is required for both steps of mRNA splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

PRP4: a protein of the yeast U4/U6 small nuclear ribonucleoprotein particle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

PRP4 (RNA4) from Saccharomyces cerevisiae: its gene product is associated with the U4/U6 small nuclear ribonucleoprotein particle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

PRP18, a protein required for the second reaction in pre-mRNA splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Characterization of VPS34, a gene required for vacuolar protein sorting and vacuole segregation in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Self-splicing group II and nuclear pre-mRNA introns: how similar are they?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

The PRP4 (RNA4) protein of Saccharomyces cerevisiae is associated with the 5' portion of the U4 small nuclear RNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Structure of spliceosomal snRNPs and their role in pre-mRNA splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Pre-mRNA splicing in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

DMSO-enhanced whole cell yeast transformation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

The yeast PRP8 protein interacts directly with pre-mRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Who's on first? The U1 snRNP-5' splice site interaction and splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

A putative zinc finger protein, Saccharomyces cerevisiae Vps18p, affects late Golgi functions required for vacuolar protein sorting and efficient alpha-factor prohormone maturation

29 September 2017

1 reference

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Biochemical Mechanisms of Constitutive and Regulated Pre-mRNA Splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Genetic depletion indicates a late role for U5 snRNP during in vitro spliceosome assembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Antisense probes containing 2-aminoadenosine allow efficient depletion of U5 snRNP from HeLa splicing extracts

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

PROSITE: a dictionary of sites and patterns in proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

A splicing factor that is inactivated during in vivo heat shock is functionally equivalent to the [U4/U6.U5] triple snRNP-specific proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Stages in the second reaction of pre-mRNA splicing: the final step is ATP independent

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

An essential yeast snRNA with a U5-like domain is required for splicing in vivo

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Electrophoresis of ribonucleoproteins reveals an ordered assembly pathway of yeast splicing complexes

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

In vitro assembly of yeast U6 snRNP: a functional assay

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Isolation of a gene for a regulatory 15-kDa subunit of mitochondrial F1F0-ATPase and construction of mutant yeast lacking the protein

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Two domains of yeast U6 small nuclear RNA required for both steps of nuclear precursor messenger RNA splicing

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Domains of yeast U4 spliceosomal RNA required for PRP4 protein binding, snRNP-snRNP interactions, and pre-mRNA splicing in vivo

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

mRNA-type introns in U6 small nuclear RNA genes: implications for the catalysis in pre-mRNA splicing

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Immunoaffinity purification of a [U4/U6.U5] tri-snRNP from human cells

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Cyclic 2',3'-phosphates and nontemplated nucleotides at the 3' end of spliceosomal U6 small nuclear RNA's

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Synthetic lethal mutations suggest interactions between U5 small nuclear RNA and four proteins required for the second step of splicing

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

The intrinsic ATPase of DNA gyrase

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

The "spliceosome": yeast pre-messenger RNA associates with a 40S complex in a splicing-dependent reaction.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=359689

Mutations in yeast U5 snRNA alter the specificity of 5' splice-site cleavage

20 June 2018

1 reference

12 December 2020

9 Specific labeling of 3′ termini of RNA with T4 RNA ligase

1 reference

12 December 2020

The effect of temperature-sensitive RNA mutants on the transcription products from cloned ribosomal protein genes of yeast

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12 December 2020

Isolation of small nuclear ribonucleoproteins containing U1, U2, U4, U5, and U6 RNAs

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12 December 2020

Fractionation and characterization of human small nuclear ribonucleoproteins containing U1 and U2 RNAs

1 reference

12 December 2020

Yeast contains small nuclear RNAs encoded by single copy genes

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12 December 2020

U5 snRNA interacts with exon sequences at 5′ and 3′ splice sites

1 reference

12 December 2020

Stepwise assembly of a pre-mRNA splicing complex requires U-snRNPs and specific intron sequences

1 reference

12 December 2020

Affinity chromatography of splicing complexes: U2, U5, and U4 + U6 small nuclear ribonucleoprotein particles in the spliceosome

1 reference

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The yeast RNA gene products are essential for mRNA splicing in vitro

1 reference

12 December 2020

Identification of a yeast snRNP protein and detection of snRNP-snRNP interactions

1 reference

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Synthesis and sequence-specific proteolysis of hybrid proteins produced in Escherichia coli

1 reference

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Splicing a spliceosomal RNA

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12 December 2020

Identifiers

DOI

10.1128/MCB.13.5.2959

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PMC publication ID

359689

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1 reference