RNA degradation paths in a 12-subunit nuclear exosome complex (Q27701670)

Exosome non-catalytic core subunit RRP4 YHR069C

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Exosome non-catalytic core subunit RRP45 YDR280W

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Exosome non-catalytic core subunit RRP46 YGR095C

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Exosome non-catalytic core subunit RRP40 YOL142W

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Exosome non-catalytic core subunit SKI6 YGR195W

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Exosome nuclease subunit RRP6 YOR001W

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Exosome non-catalytic core subunit RRP43 YCR035C

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Exosome non-catalytic core subunit RRP42 YDL111C

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Exosome non-catalytic core subunit MTR3 YGR158C

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The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

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Debora Lika Makino

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Benjamin Schuch

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Elisabeth Stegmann

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Marc Baumgärtner

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language of work or name

English

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publication date

6 August 2015

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published in

Nature

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volume

524

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issue

7563

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page(s)

54-8

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cites work

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https://api.crossref.org/works/10.1038%2FNATURE14865

The eukaryotic RNA exosome

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RNA decay machines: the exosome

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The RNA exosome and proteasome: common principles of degradation control

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The many pathways of RNA degradation

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https://api.crossref.org/works/10.1038%2FNATURE14865

Functions of the exosome in rRNA, snoRNA and snRNA synthesis

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https://api.crossref.org/works/10.1038%2FNATURE14865

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

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https://api.crossref.org/works/10.1038%2FNATURE14865

RNA exosome depletion reveals transcription upstream of active human promoters

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RNA quality control in the nucleus: the Angels' share of RNA.

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Functions of the Cytoplasmic Exosome

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https://api.crossref.org/works/10.1038%2FNATURE14865

A single subunit, Dis3, is essentially responsible for yeast exosome core activity

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https://api.crossref.org/works/10.1038%2FNATURE14865

Reconstitution, activities, and structure of the eukaryotic RNA exosome

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Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex

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https://api.crossref.org/works/10.1038%2FNATURE14865

The yeast exosome functions as a macromolecular cage to channel RNA substrates for degradation

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https://api.crossref.org/works/10.1038%2FNATURE14865

The RNA exosome complex central channel controls both exonuclease and endonuclease Dis3 activities in vivo and in vitro

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https://api.crossref.org/works/10.1038%2FNATURE14865

Transcriptome-wide analysis of exosome targets

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Exo- and endoribonucleolytic activities of yeast cytoplasmic and nuclear RNA exosomes are dependent on the noncatalytic core and central channel.

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Visualization of distinct substrate-recruitment pathways in the yeast exosome by EM.

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https://api.crossref.org/works/10.1038%2FNATURE14865

Rrp6, Rrp47 and Cofactors of the Nuclear Exosome

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https://api.crossref.org/works/10.1038%2FNATURE14865

The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE14865

Rrp6p, the yeast homologue of the human PM-Scl 100-kDa autoantigen, is essential for efficient 5.8 S rRNA 3' end formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE14865

Structure of an Rrp6–RNA exosome complex bound to poly(A) RNA

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family

21 January 2018

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Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain

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Evidence for core exosome independent function of the nuclear exoribonuclease Rrp6p

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Intracellular ribonucleases involved in transcript processing and decay: precision tools for RNA.

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RNA channelling by the eukaryotic exosome

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Activities of human RRP6 and structure of the human RRP6 catalytic domain

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

The structure of the eukaryotic ribosome at 3.0 Å resolution

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

Integration, scaling, space-group assignment and post-refinement

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

Data processing and analysis with the autoPROC toolbox

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

Overview of the CCP4 suite and current developments

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

How good are my data and what is the resolution?

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865

PHENIX: a comprehensive Python-based system for macromolecular structure solution

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Phasercrystallographic software

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Features and development of Coot

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MolProbity: all-atom structure validation for macromolecular crystallography

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Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard

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Fitting molecular fragments into electron density

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https://api.crossref.org/works/10.1038%2FNATURE14865

Towards automated crystallographic structure refinement with phenix.refine

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https://api.crossref.org/works/10.1038%2FNATURE14865

Substrate recognition and catalysis by the exoribonuclease RNase R.

21 January 2018

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NIH Image to ImageJ: 25 years of image analysis

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE14865