Structure of the membrane domain of respiratory complex I (Q27671602)

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scientific article published on August 7, 2011

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English	Structure of the membrane domain of respiratory complex I	scientific article published on August 7, 2011

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scholarly article

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title

Structure of the membrane domain of respiratory complex I (English)

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author

Rouslan Efremov

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1

object named as

Rouslan G Efremov

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Leonid Sazanov

object named as

Leonid A Sazanov

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2

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language of work or name

English

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publication date

7 August 2011

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full work available at URL

http://www.nature.com/articles/nature10330.pdf

file format

Portable Document Format

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Crossref

DOI

10.1038/NATURE10330

reference URL

https://api.crossref.org/works/10.1038/NATURE10330

retrieved

9 December 2024

http://www.nature.com/articles/nature10330

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Crossref

DOI

10.1038/NATURE10330

reference URL

https://api.crossref.org/works/10.1038/NATURE10330

retrieved

9 December 2024

published in

Nature

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volume

476

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issue

7361

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page(s)

414-20

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cites work

Human complex I defects in neurodegenerative diseases

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

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Complex I: a chimaera of a redox and conformation-driven proton pump?

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

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Leber hereditary optic neuropathy mutations in the ND6 subunit of mitochondrial complex I affect ubiquinone reduction kinetics in a bacterial model of the enzyme

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of respiratory complex I: "supernumerary" subunits are present in the alpha-proteobacterial enzyme

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A role for native lipids in the stabilization and two-dimensional crystallization of the Escherichia coli NADH-ubiquinone oxidoreductase (complex I).

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies on the electron transfer pathway, topography of iron-sulfur centers, and site of coupling in NADH-Q oxidoreductase.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bovine complex I is a complex of 45 different subunits.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phasercrystallographic software

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Version 1.2 of the Crystallography and NMR system

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MolProbity: all-atom structure validation for macromolecular crystallography

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discontinuous membrane helices in transport proteins and their correlation with function

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolutionary origin of a secondary structure: π-helices as cryptic but widespread insertional variations of α-helices that enhance protein functionality

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Buccaneer software for automated model building. 1. Tracing protein chains

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of the proton-translocating NADH: ubiquinone oxidoreductase from Escherichia coli.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single site mutations in the hetero-oligomeric Mrp antiporter from alkaliphilic Bacillus pseudofirmus OF4 that affect Na+/H+ antiport activity, sodium exclusion, individual Mrp protein levels, or Mrp complex formation.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The proton-translocating NADH-quinone oxidoreductase in the respiratory chain: the secret unlocked

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the NuoM (ND4) subunit in Escherichia coli NDH-1: conserved charged residues essential for energy-coupled activities

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conserved lysine residues of the membrane subunit NuoM are involved in energy conversion by the proton-pumping NADH:ubiquinone oxidoreductase (Complex I).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The architecture of respiratory complex I

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutagenesis of the L, M, and N subunits of Complex I from Escherichia coli indicates a common role in function

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural Basis for the Mechanism of Respiratory Complex I

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the membrane domain subunit NuoJ (ND6) of the NADH-quinone oxidoreductase from Escherichia coli by chromosomal DNA manipulation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new hypothesis on the simultaneous direct and indirect proton pump mechanisms in NADH‐quinone oxidoreductase (complex I)

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structures of membrane proteins

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A pair of membrane-embedded acidic residues in the NuoK subunit of Escherichia coli NDH-1, a counterpart of the ND4L subunit of the mitochondrial complex I, are required for high ubiquinone reductase activity

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondria, oxidants, and aging

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A model of the proton translocation mechanism of complex I

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The transmembrane helices of the L, M, and N subunits of Complex I fromE. colican be assigned on the basis of conservation and hydrophobic moment analysis

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transmembrane topology of the NuoL, M and N subunits of NADH:quinone oxidoreductase and their homologues among membrane-bound hydrogenases and bona fide antiporters

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Membrane Subunit NuoL(ND5) Is Involved in the Indirect Proton Pumping Mechanism of Escherichia coli Complex I

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative protein structure modeling using Modeller

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional modules and structural basis of conformational coupling in mitochondrial complex I.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PHENIX: building new software for automated crystallographic structure determination

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular Pathways of Neurodegeneration in Parkinson's Disease

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The 'antiporter module' of respiratory chain complex I includes the MrpC/NuoK subunit -- a revision of the modular evolution scheme

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The NADH:ubiquinone oxidoreductase (complex I) of respiratory chains

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CCP4 suite: programs for protein crystallography

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

-->H+/2e- stoichiometry in NADH-quinone reductase reactions catalyzed by bovine heart submitochondrial particles.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Energy converting NADH:quinone oxidoreductase (complex I).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Possible roles of two quinone molecules in direct and indirect proton pumps of bovine heart NADH-quinone oxidoreductase (complex I).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Iron-sulfur clusters/semiquinones in complex I.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The preference of tryptophan for membrane interfaces.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A motif for quinone binding sites in respiratory and photosynthetic systems

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electron-density map interpretation

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coot: model-building tools for molecular graphics

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Projection structure of the membrane domain of Escherichia coli respiratory complex I at 8 A resolution

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutagenesis of Subunit N of the Escherichia coli Complex I. Identification of the Initiation Codon and the Sensitivity of Mutants to Decylubiquinone

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The ND5 subunit was labeled by a photoaffinity analogue of fenpyroximate in bovine mitochondrial complex I.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conservation of sequences of subunits of mitochondrial complex I and their relationships with other proteins

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of Subunit NuoL for Proton Translocation by Respiratory Complex I

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the membrane domain subunit NuoK (ND4L) of the NADH-quinone oxidoreductase from Escherichia coli

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Respiratory complex I: mechanistic and structural insights provided by the crystal structure of the hydrophilic domain

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of bacteriorhodopsin at 1.55 A resolution

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21822288

retrieved

12 December 2020

based on heuristic

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[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

1 reference

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Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNATURE10330

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1038%2FNATURE10330

retrieved

7 January 2021

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Identifiers

DOI

10.1038/NATURE10330

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stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3908241

Dimensions Publication ID

1039227740

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OpenCitations bibliographic resource ID

3908241

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3908241

PubMed publication ID

21822288

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3908241

 

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