Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism (Q27660298)

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21 January 2020

title

Structures of ClpP in complex with acyldepsipeptide antibiotics reveal its activation mechanism (English)

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21 January 2020

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21 January 2020

Byung-Gil Lee

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21 January 2020

Eun Young Park

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21 January 2020

Kyung-Eun Lee

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21 January 2020

Hyesung Jeon

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21 January 2020

Kwang Hoon Sung

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21 January 2020

Holger Paulsen

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21 January 2020

Helga Rübsamen-Schaeff

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21 January 2020

Heike Brötz-Oesterhelt

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21 January 2020

publication date

21 March 2010

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Nature Structural & Molecular Biology

21 January 2020

published in

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volume

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issue

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21 January 2020

page(s)

471-478

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Crystal structure at 1.9A of E. coli ClpP with a peptide covalently bound at the active site.

21 January 2020

cites work

1 reference

Sculpting the proteome with AAA(+) proteases and disassembly machines.

21 January 2018

1 reference

ATP-dependent proteases of bacteria: recognition logic and operating principles

31 March 2020

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Posttranslational quality control: folding, refolding, and degrading proteins.

31 March 2020

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Proteolysis in Bacterial Regulatory Circuits

31 March 2020

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Communication between ClpX and ClpP during substrate processing and degradation

31 March 2020

1 reference

ClpP: a distinctive family of cylindrical energy-dependent serine proteases

31 March 2020

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A degradation signal recognition in prokaryotes

31 March 2020

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Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases

31 March 2020

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Crystal Structure of ClpX Molecular Chaperone from Helicobacter pylori

31 March 2020

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Regulation by proteolysis in bacterial cells

31 March 2020

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Dysregulation of bacterial proteolytic machinery by a new class of antibiotics

31 March 2020

1 reference

Medicinal chemistry optimization of acyldepsipeptides of the enopeptin class antibiotics.

31 March 2020

1 reference

The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease

31 March 2020

1 reference

Molecular determinants of complex formation between Clp/Hsp100 ATPases and the ClpP peptidase.

31 March 2020

1 reference

The asymmetry in the mature amino-terminus of ClpP facilitates a local symmetry match in ClpAP and ClpXP complexes

31 March 2020

1 reference

Crystallography and mutagenesis point to an essential role for the N-terminus of human mitochondrial ClpP.

31 March 2020

1 reference

The ClpP double ring tetradecameric protease exhibits plastic ring-ring interactions, and the N termini of its subunits form flexible loops that are essential for ClpXP and ClpAP complex formation

31 March 2020

1 reference

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

31 March 2020

1 reference

Importance of heptameric ring integrity for activity of Escherichia coli ClpP.

31 March 2020

1 reference

The structural basis for the activation and peptide recognition of bacterial ClpP

31 March 2020

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Crystal structure of the Bowman-Birk inhibitor from barley seeds in ternary complex with porcine trypsin

31 March 2020

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Kunitz-type soybean trypsin inhibitor revisited: refined structure of its complex with porcine trypsin reveals an insight into the interaction between a homologous inhibitor from Erythrina caffra and tissue-type plasminogen activator

31 March 2020

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Distinct static and dynamic interactions control ATPase-peptidase communication in a AAA+ protease

31 March 2020

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Crystal and solution structures of an HslUV protease-chaperone complex

31 March 2020

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A gated channel into the proteasome core particle

31 March 2020

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Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's alpha ring opens the gate for substrate entry

31 March 2020

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The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions.

31 March 2020

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Crystal structure of HslUV complexed with a vinyl sulfone inhibitor: corroboration of a proposed mechanism of allosteric activation of HslV by HslU

31 March 2020

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The structures of HsIU and the ATP-dependent protease HsIU-HsIV

31 March 2020

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Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism

31 March 2020

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31 March 2020

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Structure of 20S proteasome from yeast at 2.4 A resolution

31 March 2020

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Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution

31 March 2020

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The axial channel of the proteasome core particle is gated by the Rpt2 ATPase and controls both substrate entry and product release

31 March 2020

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Structural basis for the activation of 20S proteasomes by 11S regulators

31 March 2020

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ATP binding to PAN or the 26S ATPases causes association with the 20S proteasome, gate opening, and translocation of unfolded proteins.

31 March 2020

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Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases

31 March 2020

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Structural basis of SspB-tail recognition by the zinc binding domain of ClpX

31 March 2020

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Strategies for macromolecular synchrotron crystallography.

31 March 2020

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An approach to multi-copy search in molecular replacement

31 March 2020

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Improved methods for building protein models in electron density maps and the location of errors in these models

31 March 2020

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

31 March 2020

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Coot: model-building tools for molecular graphics

31 March 2020

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EMAN: semiautomated software for high-resolution single-particle reconstructions

31 March 2020

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Processive degradation of proteins by the ATP-dependent Clp protease from Escherichia coli. Requirement for the multiple array of active sites in ClpP but not ATP hydrolysis.

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20305655

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.1787

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Dimensions Publication ID

21 January 2020

1029358071

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Consolidated OpenCitations Corpus – April 2017

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