Structural Insight into Methyl-Coenzyme M Reductase Chemistry Using Coenzyme B Analogues, (Q27664049)

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English	Structural Insight into Methyl-Coenzyme M Reductase Chemistry Using Coenzyme B Analogues,	scientific article

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title

Structural Insight into Methyl-Coenzyme M Reductase Chemistry Using Coenzyme B Analogues, (English)

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sponsor

Reaction intermediates in the O2 activation mechanism of an extradiol dioxygenase: visualising catalytic protons and active site dynamics in crystallo

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stated in

Gateway to Research

Gateway to Research Project ID

BB/H001905/1

retrieved

26 April 2019

author

Arwen R Pearson

series ordinal

3

object named as

Arwen R Pearson

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Carrie M Wilmot

object named as

Carrie M Wilmot

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5

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author name string

Peder E Cedervall

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1

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Mishtu Dey

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2

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Stephen W Ragsdale

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4

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language of work or name

English

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publication date

7 September 2010

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published in

Biochemistry

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volume

49

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issue

35

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page(s)

7683-93

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cites work

On the mechanism of biological methane formation: structural evidence for conformational changes in methyl-coenzyme M reductase upon substrate binding

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PubMed Central

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20 March 2017

Comparison of three methyl-coenzyme M reductases from phylogenetically distant organisms: unusual amino acid modification, conservation and adaptation

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20 March 2017

Crystal Structure of Methyl-Coenzyme M Reductase: The Key Enzyme of Biological Methane Formation

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20 March 2017

Coot: model-building tools for molecular graphics

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20 March 2017

The CCP4 suite: programs for protein crystallography

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20 March 2017

Biochemistry of methanogenesis: a tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture

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PubMed Central

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20 March 2017

Preparation of coenzyme M analogs and their activity in the methyl coenzyme M reductase system of Methanobacterium thermoautotrophicum

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PubMed Central

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20 March 2017

Binding of coenzyme B induces a major conformational change in the active site of methyl-coenzyme M reductase

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PubMed Central

reference URL

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29 September 2017

Geometric and electronic structures of the Ni(I) and methyl-Ni(III) intermediates of methyl-coenzyme M reductase

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PubMed Central

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29 September 2017

Coenzyme B induced coordination of coenzyme M via its thiol group to Ni(I) of F430 in active methyl-coenzyme M reductase

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PubMed Central

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29 September 2017

Methane formation by reaction of a methyl thioether with a photo-excited nickel thiolate--a process mimicking methanogenesis in archaea.

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PubMed Central

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29 September 2017

Physiological importance of the heterodisulfide of coenzyme M and 7-mercaptoheptanoylthreonine phosphate in the reduction of carbon dioxide to methane in Methanobacterium

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PubMed Central

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29 September 2017

Photoactivation of the 2-(methylthio)ethanesulfonic acid reductase from Methanobacterium

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PubMed Central

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29 September 2017

Characterization of alkyl-nickel adducts generated by reaction of methyl-coenzyme m reductase with brominated acids

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PubMed Central

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2 June 2018

The final step in methane formation. Investigations with highly purified methyl-CoM reductase (component C) from Methanobacterium thermoautotrophicum (strain Marburg).

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PubMed Central

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2 June 2018

Synthesis of 7-mercaptoheptanoylthreonine phosphate and its activity in the methylcoenzyme M methylreductase system

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PubMed Central

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2 June 2018

Coordination and binding geometry of methyl-coenzyme M in the red1m state of methyl-coenzyme M reductase

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PubMed Central

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27 November 2018

A nickel hydride complex in the active site of methyl-coenzyme m reductase: implications for the catalytic cycle

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PubMed Central

reference URL

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27 November 2018

A new mechanism for methane production from methyl-coenzyme M reductase as derived from density functional calculations

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

Characterization of the thioether product formed from the thiolytic cleavage of the alkyl-nickel bond in methyl-coenzyme M reductase

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

retrieved

27 November 2018

Methane as fuel for anaerobic microorganisms

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

Formation of a Nickel−Methyl Species in Methyl-Coenzyme M Reductase, an Enzyme Catalyzing Methane Formation

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

retrieved

27 November 2018

Two sub-states of the red2 state of methyl-coenzyme M reductase revealed by high-field EPR spectroscopy.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

Temperature dependence of methyl-coenzyme M reductase activity and of the formation of the methyl-coenzyme M reductase red2 state induced by coenzyme B.

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PubMed Central

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27 November 2018

Probing the reactivity of Ni in the active site of methyl-coenzyme M reductase with substrate analogues

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

Spectroscopic investigation of the nickel-containing porphinoid cofactor F(430). Comparison of the free cofactor in the (+)1, (+)2 and (+)3 oxidation states with the cofactor bound to methyl-coenzyme M reductase in the silent, red and ox forms

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PubMed Central

reference URL

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27 November 2018

Catalysis by methyl-coenzyme M reductase: a theoretical study for heterodisulfide product formation

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

Characterization of the MCRred2 form of methyl-coenzyme M reductase: a pulse EPR and ENDOR study

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

X-ray absorption and resonance Raman studies of methyl-coenzyme M reductase indicating that ligand exchange and macrocycle reduction accompany reductive activation.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

The nickel enzyme methyl-coenzyme M reductase from methanogenic archaea: In vitro induction of the nickel-based MCR-ox EPR signals from MCR-red2.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

retrieved

27 November 2018

The nickel enzyme methyl-coenzyme M reductase from methanogenic archaea: in vitro interconversions among the EPR detectable MCR-red1 and MCR-red2 states

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098740

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27 November 2018

Mechanistic studies of methane biogenesis by methyl-coenzyme M reductase: evidence that coenzyme B participates in cleaving the C-S bond of methyl-coenzyme M.

1 reference

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PubMed Central

reference URL

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27 November 2018

Cryoreduction of methyl-coenzyme M reductase: EPR characterization of forms, MCR(ox1) and MCR (red1)

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mechanism from quantum chemical studies for methane formation in methanogenesis

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coordination and geometry of the nickel atom in active methyl-coenzyme M reductase from Methanothermobacter marburgensis as detected by X-ray absorption spectroscopy

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

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Substrate-analogue-induced changes in the nickel-EPR spectrum of active methyl-coenzyme-M reductase from Methanobacterium thermoautotrophicum

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Spin Density and Coenzyme M Coordination Geometry of the ox1 Form of Methyl-Coenzyme M Reductase: A Pulse EPR Study

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A nickel-alkyl bond in an inactivated state of the enzyme catalyzing methane formation

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

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Spectroscopic and kinetic studies of the reaction of bromopropanesulfonate with methyl-coenzyme M reductase

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

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Biochemical and spectroscopic studies of the electronic structure and reactivity of a methyl-Ni species formed on methyl-coenzyme M reductase

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Is there a Ni-methyl intermediate in the mechanism of methyl-coenzyme M reductase?

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

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Processing of X-ray diffraction data collected in oscillation mode

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Component C of the methylreductase system of Methanobacterium

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Incorporation of 8 succinate per mol nickel into factors F430 by Methanobacterium thermoautotrophicum

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

retrieved

12 December 2020

based on heuristic

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Presence of nickel in factor F430 from Methanobacterium bryantii

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biosynthetic evidence for a nickel tetrapyrrole structure of factor F430 from Methanobacterium thermoautotrophicum

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

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Titanium (III) citrate as a nontoxic oxidation-reduction buffering system for the culture of obligate anaerobes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purified methyl-coenzyme-M reductase is activated when the enzyme-bound coenzyme F430 is reduced to the nickel(I) oxidation state by titanium(III) citrate

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of Methyl-SCoM Reductase to High Specific Activity after Treatment of Whole Cells with Sodium Sulfide

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20707311

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12 December 2020

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Identifiers

DOI

10.1021/BI100458D

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PMC publication ID

3098740

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PubMed publication ID

20707311

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ResearchGate publication ID

45648098

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