The Structural Basis for Activation of the Rab Ypt1p by the TRAPP Membrane-Tethering Complexes (Q27650964)

TRAPP complex core subunit BET3 YKR068C

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TRAPP subunit TRS31 YDR472W

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TRAPP subunit TRS23 YDR246W

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Yiying Cai

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Harvey F Chin

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Darina Lazarova

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Shekar Menon

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Chunmei Fu

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Huaqing Cai

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Anthony Sclafani

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David W Rodgers

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Enrique M De La Cruz

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Karin M Reinisch

Crystal structure of the Sec4p⋅Sec2p complex in the nucleotide exchanging intermediate state

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language of work or name

English

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publication date

27 June 2008

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published in

Cell

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volume

133

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issue

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page(s)

1202-13

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cites work

1 reference

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Structural basis for Rab GTPase activation by VPS9 domain exchange factors

20 March 2017

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A Catalytic Coiled Coil: Structural Insights into the Activation of the Rab GTPase Sec4p by Sec2p

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

The architecture of the multisubunit TRAPP I complex suggests a model for vesicle tethering

20 March 2017

1 reference

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Unique self-palmitoylation activity of the transport protein particle component Bet3: a mechanism required for protein stability

20 March 2017

1 reference

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mBet3p is required for homotypic COPII vesicle tethering in mammalian cells

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Structural basis of family-wide Rab GTPase recognition by rabenosyn-5

20 March 2017

1 reference

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Structure of palmitoylated BET3: insights into TRAPP complex assembly and membrane localization

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Structural basis for guanine nucleotide exchange on Ran by the regulator of chromosome condensation (RCC1)

20 March 2017

1 reference

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The structural basis of the activation of Ras by Sos

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion

20 March 2017

1 reference

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The CCP4 suite: programs for protein crystallography

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Substructure solution with SHELXD

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

20 March 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

29 September 2017

1 reference

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Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

20 March 2017

1 reference

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Preparation of selenomethionyl proteins for phase determination

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

TRAPPI tethers COPII vesicles by binding the coat subunit Sec23.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

TRAPPII subunits are required for the specificity switch of a Ypt-Rab GEF.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Mutants in trs120 disrupt traffic from the early endosome to the late Golgi

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

TRAPP I implicated in the specificity of tethering in ER-to-Golgi transport

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

The TRAPP complex is a nucleotide exchanger for Ypt1 and Ypt31/32.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Identification and characterization of five new subunits of TRAPP.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Rab1 interaction with a GM130 effector complex regulates COPII vesicle cis--Golgi tethering

20 March 2017

1 reference

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GEFs and GAPs: critical elements in the control of small G proteins

20 March 2017

1 reference

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SNAREs--engines for membrane fusion

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Rabs and their effectors: achieving specificity in membrane traffic

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Structural basis for activation of ARF GTPase: mechanisms of guanine nucleotide exchange and GTP-myristoyl switching

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Checking your imagination: applications of the free R value

7 April 2017

1 reference

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Coats, tethers, Rabs, and SNAREs work together to mediate the intracellular destination of a transport vesicle

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Structure of the Bet3-Tpc6B core of TRAPP: two Tpc6 paralogs form trimeric complexes with Bet3 and Mum2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Biochemical and crystallographic studies reveal a specific interaction between TRAPP subunits Trs33p and Bet3p

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Post-crystallization treatments for improving diffraction quality of protein crystals.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Crystal structure of bet3 reveals a novel mechanism for Golgi localization of tethering factor TRAPP.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Structure, exchange determinants, and family-wide rab specificity of the tandem helical bundle and Vps9 domains of Rabex-5.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Magnesium, ADP, and actin binding linkage of myosin V: evidence for multiple myosin V-ADP and actomyosin V-ADP states

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Model building and refinement practice

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Vps9, Rabex-5 and DSS4: proteins with weak but distinct nucleotide-exchange activities for Rab proteins

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

TRAPP stimulates guanine nucleotide exchange on Ypt1p

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

COPII-cargo interactions direct protein sorting into ER-derived transport vesicles

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2465810

Sec2 is a Highly Efficient Exchange Factor for the Rab Protein Sec4

27 November 2018

1 reference

12 December 2020

Processing of X-ray diffraction data collected in oscillation mode

1 reference

12 December 2020

[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

1 reference

12 December 2020

The Kinetic Mechanism of Ran-Nucleotide Exchange Catalyzed by RCC1

1 reference

12 December 2020

10.1016/J.CELL.2008.04.049

Identifiers

DOI

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PubMed publication ID

18585354

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