X-ray crystallographic analysis of the sulfur carrier protein SoxY fromChlorobium limicolaf.thiosulfatophilumreveals a tetrameric structure (Q27643920)

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English	X-ray crystallographic analysis of the sulfur carrier protein SoxY fromChlorobium limicolaf.thiosulfatophilumreveals a tetrameric structure	scientific article

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title

X-ray crystallographic analysis of the sulfur carrier protein SoxY fromChlorobium limicolaf.thiosulfatophilumreveals a tetrameric structure (English)

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author

Jozef Van Beeumen

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4

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Jozef Van Beeumen

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author name string

Jan Stout

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1

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Gonzalez Van Driessche

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2

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Savvas N Savvides

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3

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publication date

April 2007

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published in

Protein Science

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volume

16

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issue

4

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page(s)

589-601

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cites work

Structural basis for the oxidation of thiosulfate by a sulfur cycle enzyme

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Natural beta-sheet proteins use negative design to avoid edge-to-edge aggregation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Use of TLS parameters to model anisotropic displacements in macromolecular refinement

2 references

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

The atomic structure of protein-protein recognition sites

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Principles of protein-protein interactions

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Satisfying hydrogen bonding potential in proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

The interpretation of protein structures: Estimation of static accessibility

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Many of the immunoglobulin superfamily domains in cell adhesion molecules and surface receptors belong to a new structural set which is close to that containing variable domains

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

The immunoglobulin fold. Structural classification, sequence patterns and common core

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

How good are predictions of protein secondary structure?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

The immunoglobulin superfamily--domains for cell surface recognition

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Turns in peptides and proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

20 March 2017

Structure, function, and evolution of transient and obligate protein-protein interactions

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Prokaryotic sulfur oxidation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Novel genes of the dsr gene cluster and evidence for close interaction of Dsr proteins during sulfur oxidation in the phototrophic sulfur bacterium Allochromatium vinosum

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

The Tat protein translocation pathway and its role in microbial physiology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Common features in structures and sequences of sandwich-like proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

The cysteine residue of the SoxY protein as the active site of protein-bound sulfur oxidation of Paracoccus pantotrophus GB17.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

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Novel genes of the sox gene cluster, mutagenesis of the flavoprotein SoxF, and evidence for a general sulfur-oxidizing system in Paracoccus pantotrophus GB17.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

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Oxidation of reduced inorganic sulfur compounds by bacteria: emergence of a common mechanism?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

STRAP: editor for STRuctural Alignments of Proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Novel genes coding for lithotrophic sulfur oxidation of Paracoccus pantotrophus GB17.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

The immunoglobulin fold family: sequence analysis and 3D structure comparisons

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Physiology and genetics of sulfur-oxidizing bacteria

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Cloning and characterization of sulfite dehydrogenase, two c-type cytochromes, and a flavoprotein of Paracoccus denitrificans GB17: essential role of sulfite dehydrogenase in lithotrophic sulfur oxidation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Studies of protein-protein interfaces: a statistical analysis of the hydrophobic effect

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

A role for surface hydrophobicity in protein-protein recognition

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Interior and surface of monomeric proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Principles of protein-protein recognition

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

29 September 2017

Crystallization, preliminary crystallographic analysis and phasing of the thiosulfate-binding protein SoxY from Chlorobium limicola f. thiosulfatophilum

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

2 June 2018

Are protein-protein interfaces more conserved in sequence than the rest of the protein surface?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

2 June 2018

Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

2 June 2018

Oxidative metabolism of inorganic sulfur compounds by bacteria

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

2 June 2018

Protein binding versus protein folding: the role of hydrophilic bridges in protein associations

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

2 June 2018

A dissection of specific and non-specific protein-protein interfaces

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Dissecting subunit interfaces in homodimeric proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Structural characterisation and functional significance of transient protein-protein interactions

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

On the significance of alternating patterns of polar and non-polar residues in beta-strands

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Identification of a thiosulfate utilization gene cluster from the green phototrophic bacterium Chlorobium limicola

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Conservation helps to identify biologically relevant crystal contacts

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Protein-protein interfaces: analysis of amino acid conservation in homodimers

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Hydrogen bonds and salt bridges across protein-protein interfaces

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

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1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2203348

retrieved

27 November 2018

Hydration of protein-protein interfaces

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17327392

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sulfur oxidation in Paracoccus pantotrophus: interaction of the sulfur-binding protein SoxYZ with the dimanganese SoxB protein

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17327392

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a new type of sulfite dehydrogenase from Paracoccus pantotrophus GB17

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17327392

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structure of interfaces between subunits of dimeric and tetrameric proteins

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17327392

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Immunoglobulin Fold

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17327392

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1110/PS.062633607

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PMC publication ID

2203348

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PubMed publication ID

17327392

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ResearchGate publication ID

6479921

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