High Apparent Dielectric Constant Inside a Protein Reflects Structural Reorganization Coupled to the Ionization of an Internal Asp (Q27640781)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17172297%20AND%20SRC:MED&resulttype=core&format=json

23 December 2019

title

High apparent dielectric constant inside a protein reflects structural reorganization coupled to the ionization of an internal Asp (English)

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23 December 2019

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23 December 2019

Daniel A Karp

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23 December 2019

Apostolos G Gittis

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23 December 2019

Mary R Stahley

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23 December 2019

Carolyn A Fitch

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23 December 2019

Bertrand García-Moreno E

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23 December 2019

language of work or name

English

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publication date

15 December 2006

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23 December 2019

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23 December 2019

volume

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23 December 2019

issue

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23 December 2019

page(s)

2041-2053

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Size versus polarizability in protein-ligand interactions: binding of noble gases within engineered cavities in phage T4 lysozyme

23 December 2019

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20 March 2017

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Molecular dynamics study of water penetration in staphylococcal nuclease.

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29 September 2017

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Stabilization of internal charges in a protein: water penetration or conformational change?

29 September 2017

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29 September 2017

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Combining conformational flexibility and continuum electrostatics for calculating pK(a)s in proteins

29 September 2017

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Experimental pK(a) values of buried residues: analysis with continuum methods and role of water penetration

29 September 2017

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Distance dependence and salt sensitivity of pairwise, coulombic interactions in a protein

29 September 2017

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What are the dielectric "constants" of proteins and how to validate electrostatic models?

29 September 2017

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Atomic resolution structures of bacteriorhodopsin photocycle intermediates: the role of discrete water molecules in the function of this light-driven ion pump

29 September 2017

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High apparent dielectric constants in the interior of a protein reflect water penetration

29 September 2017

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29 September 2017

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29 September 2017

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Macroscopic models for studies of electrostatic interactions in proteins: limitations and applicability

29 September 2017

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29 September 2017

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pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model

29 September 2017

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Contributions of the large hydrophobic amino acids to the stability of staphylococcal nuclease

29 September 2017

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Effects of temperature on protein structure and dynamics: X-ray crystallographic studies of the protein ribonuclease-A at nine different temperatures from 98 to 320 K.

29 September 2017

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29 September 2017

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29 September 2017

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Contributions of the polar, uncharged amino acids to the stability of staphylococcal nuclease: evidence for mutational effects on the free energy of the denatured state.

29 September 2017

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2 June 2018

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Residual structure in large fragments of staphylococcal nuclease: effects of amino acid substitutions.

2 June 2018

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19 June 2018

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Prediction of pKa shifts in proteins using a combination of molecular mechanical and continuum solvent calculations.

27 November 2018

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X-ray and thermodynamic studies of staphylococcal nuclease variants I92E and I92K: insights into polarity of the protein interior

27 November 2018

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On the origin of the electrostatic barrier for proton transport in aquaporin

27 November 2018

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Electrostatic basis for bioenergetics.

27 November 2018

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Electrostatic effects in highly charged proteins: salt sensitivity of pKa values of histidines in staphylococcal nuclease

27 November 2018

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Protonation/deprotonation reactions triggered by photoactivation of photoactive yellow protein from Ectothiorhodospira halophila

27 November 2018

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Experimental measurement of the effective dielectric in the hydrophobic core of a protein.

27 November 2018

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The determinants of pKas in proteins

27 November 2018

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Contributions of the ionizable amino acids to the stability of staphylococcal nuclease.

27 November 2018

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On the pH dependence of protein stability.

27 November 2018

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Electrostatic interactions in globular proteins. Different dielectric models applied to the packing of alpha-helices

27 November 2018

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The dielectric constant of a folded protein

27 November 2018

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Focusing of electric fields in the active site of Cu-Zn superoxide dismutase: effects of ionic strength and amino-acid modification

27 November 2018

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pH dependence of stability of staphylococcal nuclease: evidence of substantial electrostatic interactions in the denatured state

27 November 2018

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12 December 2020

Role of the protein side-chain fluctuations on the strength of pair-wise electrostatic interactions: comparing experimental with computed pK(a)s

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12 December 2020

The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

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12 December 2020

Mutant forms of staphylococcal nuclease with altered patterns of guanidine hydrochloride and urea denaturation

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Dielectric relaxation spectra of water adsorbed on lysozyme

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12 December 2020

Energetic contribution of side chain hydrogen bonding to the stability of staphylococcal nuclease

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12 December 2020

On the calculation of pKas in proteins

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12 December 2020

Multiple-site titration and molecular modeling: two rapid methods for computing energies and forces for ionizable groups in proteins

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12 December 2020

10.1529/BIOPHYSJ.106.090266

Identifiers

DOI

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release_vuyeunmfjrcpfgcb6ft7rircam

23 December 2019

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/vuyeunmfjrcpfgcb6ft7rircam

24 November 2022

mapped directly with Wikidata item

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23 December 2019

PubMed publication ID

17172297

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