Stress-regulated transcription factor RPN4 YDL020C (Q27552132)

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fungal protein found in Saccharomyces cerevisiae S288c

• RPN4
• stress-regulated transcription factor RPN4
• YDL020C

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Language	Label	Description	Also known as
English	Stress-regulated transcription factor RPN4 YDL020C	fungal protein found in Saccharomyces cerevisiae S288c	RPN4 stress-regulated transcription factor RPN4 YDL020C

Statements

instance of

protein

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q03465

subclass of

protein

1 reference

stated in

UniProt

retrieved

19 January 2017

UniProt protein ID

Q03465

found in taxon

Saccharomyces cerevisiae S288c

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q03465

encoded by

RPN4

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q03465

molecular function

DNA binding

determination method or standard

IEA

1 reference

retrieved

7 November 2018

stated in

GOA

curator

UniProt

UniProt protein ID

Q03465

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEA

RNA polymerase II cis-regulatory region sequence-specific DNA binding

determination method or standard

IDA

1 reference

retrieved

7 November 2018

stated in

Rpn4p acts as a transcription factor by binding to PACE, a nonamer box found upstream of 26S proteasomal and other genes in yeast

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

DNA-binding transcription activator activity, RNA polymerase II-specific

determination method or standard

IDA

2 references

retrieved

24 April 2018

stated in

Rpn4p acts as a transcription factor by binding to PACE, a nonamer box found upstream of 26S proteasomal and other genes in yeast

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

retrieved

7 November 2018

stated in

Rpn4p acts as a transcription factor by binding to PACE, a nonamer box found upstream of 26S proteasomal and other genes in yeast

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

nucleic acid binding

determination method or standard

IEA

1 reference

retrieved

7 November 2018

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEA

protein binding

determination method or standard

IPI

2 references

retrieved

7 November 2018

stated in

Genome-wide analysis identifies MYND-domain protein Mub1 as an essential factor for Rpn4 ubiquitylation

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IPI

retrieved

7 November 2018

stated in

Rpn4 is a physiological substrate of the Ubr2 ubiquitin ligase

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IPI

cell component

nucleus

determination method or standard

IEA

IDA

3 references

retrieved

7 November 2018

stated in

GOA

curator

UniProt

UniProt protein ID

Q03465

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEA

retrieved

7 November 2018

stated in

The transcription activation domain of Rpn4 is separate from its degrons

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

retrieved

7 November 2018

stated in

Extragenic suppressors of mutations in the cytoplasmic C terminus of SEC63 define five genes in Saccharomyces cerevisiae

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

biological process

negative regulation of transcription by RNA polymerase II

determination method or standard

IMP

1 reference

retrieved

7 November 2018

stated in

Inhibition of proteasomal degradation of rpn4 impairs nonhomologous end-joining repair of DNA double-strand breaks

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

transcription, DNA-templated

determination method or standard

IEA

1 reference

retrieved

24 April 2018

stated in

GOA

curator

UniProt

UniProt protein ID

Q03465

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEA

positive regulation of transcription by RNA polymerase II

determination method or standard

IMP

IDA

IGI

8 references

retrieved

7 November 2018

stated in

Rpn4p acts as a transcription factor by binding to PACE, a nonamer box found upstream of 26S proteasomal and other genes in yeast

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: a negative feedback circuit

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

Regulatory mechanisms controlling biogenesis of ubiquitin and the proteasome

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

The transcription activation domain of Rpn4 is separate from its degrons

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

Mapping of yeast Rpn4p transactivation domains

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

Regulatory mechanisms controlling biogenesis of ubiquitin and the proteasome

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IGI

retrieved

7 November 2018

stated in

Rpn4p acts as a transcription factor by binding to PACE, a nonamer box found upstream of 26S proteasomal and other genes in yeast

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

retrieved

7 November 2018

stated in

The transcription activation domain of Rpn4 is separate from its degrons

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IDA

regulation of DNA repair

determination method or standard

IMP

2 references

retrieved

7 November 2018

stated in

Inhibition of proteasomal degradation of rpn4 impairs nonhomologous end-joining repair of DNA double-strand breaks

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

positive regulation of transcription from RNA polymerase II promoter in response to stress

determination method or standard

IMP

IEP

5 references

retrieved

24 April 2018

stated in

Structure and properties of transcriptional networks driving selenite stress response in yeasts

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

24 April 2018

stated in

Yeast adaptation to mancozeb involves the up-regulation of FLR1 under the coordinate control of Yap1, Rpn4, Pdr3, and Yrr1.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

24 April 2018

stated in

Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

24 April 2018

stated in

A stress regulatory network for co-ordinated activation of proteasome expression mediated by yeast heat shock transcription factor.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

24 April 2018

stated in

A stress regulatory network for co-ordinated activation of proteasome expression mediated by yeast heat shock transcription factor.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEP

positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance

determination method or standard

IMP

1 reference

retrieved

7 November 2018

stated in

Tmc1 Is a Dynamically Regulated Effector of the Rpn4 Proteotoxic Stress Response

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

regulation of transcription, DNA-templated

determination method or standard

IEA

1 reference

retrieved

24 April 2018

stated in

GOA

curator

UniProt

UniProt protein ID

Q03465

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEA

transcription by RNA polymerase II

determination method or standard

IEA

1 reference

retrieved

24 April 2018

stated in

GOA

curator

Gene Ontology Consortium

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IEA

positive regulation of transcription from RNA polymerase II promoter in response to stress

determination method or standard

IMP

4 references

retrieved

7 November 2018

stated in

Structure and properties of transcriptional networks driving selenite stress response in yeasts

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

Yeast adaptation to mancozeb involves the up-regulation of FLR1 under the coordinate control of Yap1, Rpn4, Pdr3, and Yrr1.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

Regulatory networks revealed by transcriptional profiling of damaged Saccharomyces cerevisiae cells: Rpn4 links base excision repair with proteasomes

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

retrieved

7 November 2018

stated in

A stress regulatory network for co-ordinated activation of proteasome expression mediated by yeast heat shock transcription factor.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000002178

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q03465&geneProductId=UniProtKB:Q03465

determination method or standard

IMP

Identifiers

RefSeq protein ID

NP_010264

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

851542

UniProt protein ID

Q03465

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

Q03465

Ensembl protein ID

YDL020C

1 reference

stated in

ensembl Release 106

Ensembl protein ID

YDL020C

Saccharomyces Genome Database ID

S000002178

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

851542

 

Sitelinks

Wikipedia(0 entries)

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Wikibooks(0 entries)

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Wikiquote(0 entries)

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Wikisource(0 entries)

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Wikiversity(0 entries)

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Wikivoyage(0 entries)

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Wiktionary(0 entries)

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Multilingual sites(0 entries)

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