Ubiquitin-specific protease UBP8 YMR223W (Q27547304)

From Wikidata

Jump to navigation Jump to search

fungal protein found in Saccharomyces cerevisiae S288c

• ubiquitin-specific protease UBP8
• YMR223W
• UBP8

edit

Language	Label	Description	Also known as
English	Ubiquitin-specific protease UBP8 YMR223W	fungal protein found in Saccharomyces cerevisiae S288c	ubiquitin-specific protease UBP8 YMR223W UBP8

Statements

instance of

protein

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

P50102

subclass of

protein

1 reference

stated in

UniProt

retrieved

19 January 2017

UniProt protein ID

P50102

part of

Zinc finger, RING/FYVE/PHD-type

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Ubiquitin carboxyl-terminal hydrolase 8

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Papain-like cysteine peptidase superfamily

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Peptidase C19, ubiquitin carboxyl-terminal hydrolase family

1 reference

based on heuristic

inferred from protein domain or family

Zinc finger, UBP-type, protein family

1 reference

based on heuristic

inferred from protein domain or family

Ubiquitin specific protease domain, protein family

1 reference

based on heuristic

inferred from protein domain or family

Ubiquitin specific protease, conserved site, protein family

1 reference

based on heuristic

inferred from protein domain or family

found in taxon

Saccharomyces cerevisiae S288c

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

P50102

encoded by

UBP8

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

P50102

molecular function

peptidase activity

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

thiol-dependent deubiquitinase

determination method or standard

IEA

2 references

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

retrieved

8 April 2019

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

hydrolase activity

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

cysteine-type peptidase activity

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

molecular adaptor activity

determination method or standard

IMP

IDA

4 references

retrieved

14 February 2019

stated in

Structural Basis for Assembly and Activation of the Heterotetrameric SAGA Histone H2B Deubiquitinase Module

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

retrieved

14 February 2019

stated in

Structural Basis for Assembly and Activation of the Heterotetrameric SAGA Histone H2B Deubiquitinase Module

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IDA

retrieved

8 April 2019

stated in

Structural Basis for Assembly and Activation of the Heterotetrameric SAGA Histone H2B Deubiquitinase Module

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

retrieved

8 April 2019

stated in

Structural Basis for Assembly and Activation of the Heterotetrameric SAGA Histone H2B Deubiquitinase Module

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IDA

zinc ion binding

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

metal ion binding

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

protein binding

determination method or standard

IPI

2 references

retrieved

8 April 2019

stated in

SAGA binds TBP via its Spt8 subunit in competition with DNA: implications for TBP recruitment

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IPI

retrieved

8 April 2019

stated in

Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes

GOA

curator

IntAct protein interaction database

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IPI

thiol-dependent deubiquitinase

determination method or standard

IEA

IMP

2 references

retrieved

8 April 2019

stated in

Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

retrieved

8 April 2019

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

cell component

SAGA complex

determination method or standard

IDA

2 references

retrieved

8 April 2019

stated in

Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IDA

retrieved

8 April 2019

stated in

Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IDA

SLIK (SAGA-like) complex

determination method or standard

IDA

1 reference

retrieved

8 April 2019

stated in

Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IDA

DUBm complex

determination method or standard

IDA

1 reference

retrieved

8 April 2019

stated in

Structural Insights into the Assembly and Function of the SAGA Deubiquitinating Module

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IDA

nucleus

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

biological process

regulation of transcription, DNA-templated

determination method or standard

IEA

1 reference

retrieved

21 June 2018

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=P50102&geneProductId=UniProtKB:P50102

determination method or standard

IEA

RNA splicing

determination method or standard

IMP

1 reference

retrieved

8 April 2019

stated in

The yeast SR-like protein Npl3 links chromatin modification to mRNA processing

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

ubiquitin-dependent protein catabolic process

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

proteolysis

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

histone H3-K4 methylation

determination method or standard

IMP

1 reference

retrieved

8 April 2019

stated in

The mRNA export factor Sus1 is involved in Spt/Ada/Gcn5 acetyltransferase-mediated H2B deubiquitinylation through its interaction with Ubp8 and Sgf11.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

histone H3-K79 methylation

determination method or standard

IMP

1 reference

retrieved

8 April 2019

stated in

The mRNA export factor Sus1 is involved in Spt/Ada/Gcn5 acetyltransferase-mediated H2B deubiquitinylation through its interaction with Ubp8 and Sgf11.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

transcription, DNA-templated

determination method or standard

IEA

1 reference

retrieved

21 June 2018

stated in

GOA

curator

UniProt

UniProt protein ID

P50102

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?protein=P50102&geneProductId=UniProtKB:P50102

determination method or standard

IEA

protein deubiquitination

determination method or standard

IEA

1 reference

retrieved

8 April 2019

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

histone deubiquitination

determination method or standard

IEA

IMP

2 references

retrieved

8 April 2019

stated in

Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

GOA

curator

SGD

Saccharomyces Genome Database ID

S000004836

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IMP

retrieved

8 April 2019

stated in

GOA

curator

InterPro

reference URL

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P50102

determination method or standard

IEA

has part(s)

Ubiquitin specific protease domain

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Zinc finger, UBP-type

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Ubiquitin specific protease, conserved site

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Peptidase C19, ubiquitin carboxyl-terminal hydrolase

1 reference

stated in

InterPro Release 71.0

reference URL

http://www.ebi.ac.uk/interpro/protein/P50102

Identifiers

RefSeq protein ID

NP_013950

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

855263

UniProt protein ID

P50102

1 reference

stated in

UniProt

retrieved

25 May 2022

UniProt protein ID

P50102

Ensembl protein ID

YMR223W

1 reference

stated in

ensembl Release 106

Ensembl protein ID

YMR223W

Saccharomyces Genome Database ID

S000004836

1 reference

stated in

NCBI Gene

retrieved

20 March 2022

Entrez Gene ID

855263

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q27547304&oldid=2026848054"