MINER: software for phylogenetic motif identification (Q24813180)

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Language	Label	Description	Also known as
English	MINER: software for phylogenetic motif identification	scientific article

Statements

instance of

scholarly article

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title

MINER: software for phylogenetic motif identification (English)

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main subject

phylogenetics

1 reference

based on heuristic

inferred from title

software

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author name string

David La

series ordinal

1

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Dennis R Livesay

series ordinal

2

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language of work or name

English

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publication date

1 July 2005

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published in

Nucleic Acids Research

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volume

33

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issue

Web Server issue

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page(s)

W267-70

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cites work

ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

7 April 2017

The COG database: new developments in phylogenetic classification of proteins from complete genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

7 April 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

7 April 2017

WebLogo: A Sequence Logo Generator

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

7 April 2017

An evolutionary trace method defines binding surfaces common to protein families

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

7 April 2017

The evolutionary origins and catalytic importance of conserved electrostatic networks within TIM-barrel proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

28 September 2017

Searching for functional sites in protein structures.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

28 September 2017

ConSurf: an algorithmic tool for the identification of functional regions in proteins by surface mapping of phylogenetic information

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

28 September 2017

Predicting protein functional sites with phylogenetic motifs

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

30 May 2018

Using motif-based methods in multiple genome analyses: a case study comparing orthologous mesophilic and thermophilic proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160226

retrieved

28 November 2018

Automatic methods for predicting functionally important residues

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15980467

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Motif-based construction of a functional map for mammalian olfactory receptors

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15980467

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKI465

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DBLP publication ID

journals/nar/LaL05

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

PMC publication ID

1160226

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PubMed publication ID

15980467

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ResearchGate publication ID

7764274

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