Large scale hierarchical clustering of protein sequences (Q24798423)

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Language	Label	Description	Also known as
English	Large scale hierarchical clustering of protein sequences	scientific article

Statements

instance of

scholarly article

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title

Large scale hierarchical clustering of protein sequences (English)

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main subject

hierarchical clustering

1 reference

based on heuristic

inferred from title

author

Martin Vingron

series ordinal

3

object named as

Martin Vingron

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Jens Stoye

series ordinal

2

object named as

Jens Stoye

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author name string

Antje Krause

series ordinal

1

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language of work or name

English

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publication date

2005

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published in

BMC Bioinformatics

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volume

6

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issue

1

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page(s)

15

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cites work

The SYSTERS Protein Family Database in 2005

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

The Pfam protein families database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

The ENZYME database in 2000

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

The genome sequence of Schizosaccharomyces pombe

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

Identification of common molecular subsequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

An efficient algorithm for large-scale detection of protein families

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

Ensembl 2004

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

7 April 2017

PIRSF: family classification system at the Protein Information Resource

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

Domains, motifs and clusters in the protein universe

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

Improvements to CluSTr: the database of SWISS-PROT+TrEMBL protein clusters

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

ProtoNet: hierarchical classification of the protein space

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

iProClass: an integrated, comprehensive and annotated protein classification database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

Towards a covering set of protein family profiles

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

ProtoMap: automatic classification of protein sequences and hierarchy of protein families

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 September 2017

Graph-based clustering for finding distant relationships in a large set of protein sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 November 2018

A set-theoretic approach to database searching and clustering

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=547898

retrieved

28 November 2018

The Structure of the Web

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15663796

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2105-6-15

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3792886

DBLP publication ID

journals/bmcbi/KrauseSV05

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

Dimensions Publication ID

1000393521

0 references

OpenCitations bibliographic resource ID

3792886

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3792886

PMC publication ID

547898

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3792886

PubMed publication ID

15663796

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3792886

ResearchGate publication ID

8067388

0 references

 

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