SR proteins in vertical integration of gene expression from transcription to RNA processing to translation (Q24654094)

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scientific article published on 10 July 2009

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English	SR proteins in vertical integration of gene expression from transcription to RNA processing to translation	scientific article published on 10 July 2009

Statements

instance of

scholarly article

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review article

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stated in

Europe PubMed Central

title

SR proteins in vertical integration of gene expression from transcription to RNA processing to translation (English)

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main subject

cell biology

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author

Pingping Wang

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author name string

Xiang-Yang Zhong

series ordinal

1

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Pingping Wang

series ordinal

2

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Joonhee Han

series ordinal

3

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Michael G Rosenfeld

series ordinal

4

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Xiang-Dong Fu

series ordinal

5

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language of work or name

English

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publication date

10 July 2009

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published in

Molecular Cell

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volume

35

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issue

1

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page(s)

1-10

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cites work

A molecular link between SR protein dephosphorylation and mRNA export

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Hypophosphorylated ASF/SF2 binds TAP and is present in messenger ribonucleoproteins

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Proteomic analysis of interchromatin granule clusters

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A novel role for shuttling SR proteins in mRNA translation

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Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: evidence for local euchromatic neighborhoods

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The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions

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Sorting out the complexity of SR protein functions

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A specific subset of SR proteins shuttles continuously between the nucleus and the cytoplasm

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A serine kinase regulates intracellular localization of splicing factors in the cell cycle

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Functional expression of cloned human splicing factor SF2: homology to rna-binding proteins, U1 70K, and drosophila splicing regulators

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7 April 2017

A monoclonal antibody that recognizes a phosphorylated epitope stains lampbrush chromosome loops and small granules in the amphibian germinal vesicle

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Nuclear speckles: a model for nuclear organelles

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7 April 2017

DNA topoisomerases: structure, function, and mechanism

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7 April 2017

Unphosphorylated SR-like protein Npl3 stimulates RNA polymerase II elongation

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Genome instability: a mechanistic view of its causes and consequences

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7 April 2017

A genome-wide survey of RS domain proteins

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7 April 2017

Stimulatory effect of splicing factors on transcriptional elongation

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7 April 2017

Splicing factors SRp20 and 9G8 promote the nucleocytoplasmic export of mRNA

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7 April 2017

Specific commitment of different pre-mRNAs to splicing by single SR proteins

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7 April 2017

SR proteins: a conserved family of pre-mRNA splicing factors

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7 April 2017

Isolation of a complementary DNA that encodes the mammalian splicing factor SC35

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7 April 2017

ASF/SF2-regulated CaMKIIdelta alternative splicing temporally reprograms excitation-contraction coupling in cardiac muscle

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7 April 2017

An extensive network of coupling among gene expression machines

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7 April 2017

Pre-mRNA processing reaches back to transcription and ahead to translation

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PubMed Central

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7 April 2017

The SR protein family of splicing factors: master regulators of gene expression

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7 April 2017

Phosphorylation and functions of the RNA polymerase II CTD

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PubMed Central

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7 April 2017

The dynamics of a pre-mRNA splicing factor in living cells

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7 April 2017

SR proteins and splicing control

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PubMed Central

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7 April 2017

Macromolecular domains within the cell nucleus

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7 April 2017

The superfamily of arginine/serine-rich splicing factors

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PubMed Central

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7 April 2017

Factor required for mammalian spliceosome assembly is localized to discrete regions in the nucleus

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PubMed Central

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7 April 2017

Specific combinations of SR proteins associate with single pre-messenger RNAs in vivo and contribute different functions

1 reference

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PubMed Central

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28 September 2017

Differential chromatin marking of introns and expressed exons by H3K36me3.

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28 September 2017

Enhancing nuclear receptor-induced transcription requires nuclear motor and LSD1-dependent gene networking in interchromatin granules

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PubMed Central

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28 September 2017

The splicing-factor oncoprotein SF2/ASF activates mTORC1.

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28 September 2017

Association between active genes occurs at nuclear speckles and is modulated by chromatin environment

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28 September 2017

The splicing factor SC35 has an active role in transcriptional elongation

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PubMed Central

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28 September 2017

The splicing factor SF2/ASF regulates translation initiation by enhancing phosphorylation of 4E-BP1.

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28 September 2017

Functional integration of transcriptional and RNA processing machineries

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PubMed Central

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28 September 2017

Chromatin dynamics and gene positioning

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PubMed Central

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28 September 2017

Splicing promotes rapid and efficient mRNA export in mammalian cells

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28 September 2017

Gene regulation through nuclear organization.

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28 September 2017

The gene encoding the splicing factor SF2/ASF is a proto-oncogene

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28 September 2017

Breaking barriers to transcription elongation

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28 September 2017

Cotranscriptional processes and their influence on genome stability.

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28 September 2017

Surviving the breakup: the DNA damage checkpoint.

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28 September 2017

Molecular anatomy of a speckle

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28 September 2017

AID in somatic hypermutation and class switch recombination

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28 September 2017

Coregulated human globin genes are frequently in spatial proximity when active

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28 September 2017

Cell motility is controlled by SF2/ASF through alternative splicing of the Ron protooncogene

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28 September 2017

Regulated cellular partitioning of SR protein-specific kinases in mammalian cells

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28 September 2017

Dephosphorylation-dependent sorting of SR splicing factors during mRNP maturation.

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28 September 2017

Loss of splicing factor ASF/SF2 induces G2 cell cycle arrest and apoptosis, but inhibits internucleosomal DNA fragmentation

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28 September 2017

Reversible phosphorylation differentially affects nuclear and cytoplasmic functions of splicing factor 2/alternative splicing factor.

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28 September 2017

Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability

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28 September 2017

Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells

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28 September 2017

Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors

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28 September 2017

The key to development: interpreting the histone code?

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28 September 2017

SRprises along a messenger's journey

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28 September 2017

Dilated cardiomyopathy caused by tissue-specific ablation of SC35 in the heart

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28 September 2017

A slow RNA polymerase II affects alternative splicing in vivo

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28 September 2017

The RNA splicing factor ASF/SF2 inhibits human topoisomerase I mediated DNA relaxation.

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28 September 2017

Stability of a PKCI-1-related mRNA is controlled by the splicing factor ASF/SF2: a novel function for SR proteins

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28 September 2017

Functional characterization of SR and SR-related genes in Caenorhabditis elegans

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28 September 2017

Disruption of ATM in p53-null cells causes multiple functional abnormalities in cellular response to ionizing radiation

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28 September 2017

SR-related proteins and the processing of messenger RNA precursors

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28 September 2017

Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer

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28 September 2017

Regulation of alternative polyadenylation by U1 snRNPs and SRp20.

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28 September 2017

Genetic analysis of the SR protein ASF/SF2: interchangeability of RS domains and negative control of splicing

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PubMed Central

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28 September 2017

Dynamic relocation of transcription and splicing factors dependent upon transcriptional activity

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PubMed Central

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28 September 2017

Disruption of pre-mRNA splicing in vivo results in reorganization of splicing factors

1 reference

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PubMed Central

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28 September 2017

The essential pre-mRNA splicing factor SF2 influences 5' splice site selection by activating proximal sites.

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PubMed Central

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28 September 2017

Primary structure of the human splicing factor asf reveals similarities with drosophila regulators

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PubMed Central

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28 September 2017

Visualization of RNA transcription and processing

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PubMed Central

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28 September 2017

Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I.

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PubMed Central

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28 September 2017

Regulation of SR protein phosphorylation and alternative splicing by modulating kinetic interactions of SRPK1 with molecular chaperones

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30 May 2018

Splicing regulator SC35 is essential for genomic stability and cell proliferation during mammalian organogenesis

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PubMed Central

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30 May 2018

Perturbation of transcription elongation influences the fidelity of internal exon inclusion in Saccharomyces cerevisiae.

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30 May 2018

Compartmentalization of Eukaryotic Gene Expression: Causes and Effects

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

30 May 2018

A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

30 May 2018

Characterization of a Drosophila protein associated with boundaries of transcriptionally active chromatin.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

30 May 2018

SR protein family members display diverse activities in the formation of nascent and mature mRNPs in vivo.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

28 November 2018

Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

28 November 2018

Protein phosphorylation and the nuclear organization of pre-mRNA splicing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

28 November 2018

SR splicing factors serve as adapter proteins for TAP-dependent mRNA export

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2744344

retrieved

28 November 2018

Interdependence between Transcription and mRNP Processing and Export, and Its Impact on Genetic Stability

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19595711

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Perichromatin fibrils are in situ forms of nascent transcripts

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19595711

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Involvement of SR proteins in mRNA surveillance

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19595711

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA polymerase II targets pre-mRNA splicing factors to transcription sites in vivo

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19595711

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A splicing regulator promotes transcriptional elongation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19595711

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene Expression: The Close Coupling of Transcription and Splicing

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19595711

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SR proteins and related factors in alternative splicing.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1016%2FJ.MOLCEL.2009.06.016

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

SR proteins function in coupling RNAP II transcription to pre-mRNA splicing.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1016%2FJ.MOLCEL.2009.06.016

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

The SR protein B52/SRp55 is essential for Drosophila development

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1016%2FJ.MOLCEL.2009.06.016

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

DOI

10.1016/J.MOLCEL.2009.06.016

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2464414

OpenCitations bibliographic resource ID

2464414

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2464414

PMC publication ID

2744344

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2464414

PubMed publication ID

19595711

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2464414

ResearchGate publication ID

26664449

0 references

 

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