Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA (Q24646046)

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English	Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA	scientific article

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scholarly article

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title

Nucleosome-binding affinity as a primary determinant of the nuclear mobility of the pioneer transcription factor FoxA (English)

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author

Karolin Luger

series ordinal

3

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author name string

Takashi Sekiya

series ordinal

1

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Uma M Muthurajan

series ordinal

2

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Alexei V Tulin

series ordinal

4

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Kenneth S Zaret

series ordinal

5

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language of work or name

English

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publication date

1 April 2009

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published in

Genes & Development

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volume

23

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issue

7

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page(s)

804-9

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cites work

FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription

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Crystal structure of the nucleosome core particle at 2.8 Å resolution

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Crystal structure of globular domain of histone H5 and its implications for nucleosome binding

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Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5

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7 April 2017

Human FOX gene family (Review)

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PubMed Central

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7 April 2017

Dynamic binding of histone H1 to chromatin in living cells

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7 April 2017

Rapid exchange of histone H1.1 on chromatin in living human cells

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Gene regulatory networks and the evolution of animal body plans

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7 April 2017

Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4

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7 April 2017

Concurrent fast and slow cycling of a transcriptional activator at an endogenous promoter.

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27 September 2017

A chromatin-mediated mechanism for specification of conditional transcription factor targets

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27 September 2017

Myc-binding-site recognition in the human genome is determined by chromatin context

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27 September 2017

The DNA binding activity of p53 displays reaction-diffusion kinetics.

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27 September 2017

The initiation of liver development is dependent on Foxa transcription factors

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PubMed Central

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27 September 2017

Ligand-specific dynamics of the progesterone receptor in living cells and during chromatin remodeling in vitro

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27 September 2017

Dynamic interactions of a transcription factor with DNA are accelerated by a chromatin remodeller

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PubMed Central

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27 September 2017

Global nature of dynamic protein-chromatin interactions in vivo: three-dimensional genome scanning and dynamic interaction networks of chromatin proteins

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PubMed Central

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27 September 2017

Rapid periodic binding and displacement of the glucocorticoid receptor during chromatin remodeling

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PubMed Central

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27 September 2017

Dynamic behavior of transcription factors on a natural promoter in living cells

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PubMed Central

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27 September 2017

Regulatory phases of early liver development: paradigms of organogenesis

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PubMed Central

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27 September 2017

Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B.

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PubMed Central

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27 September 2017

The glucocorticoid receptor: rapid exchange with regulatory sites in living cells

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PubMed Central

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27 September 2017

Accessibility of a glucocorticoid response element in a nucleosome depends on its rotational positioning

1 reference

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PubMed Central

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27 September 2017

Conditional enhancement of liver-specific gene transcription

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PubMed Central

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27 September 2017

Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure

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PubMed Central

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27 September 2017

Cell-type specific activity of two glucocorticoid responsive units of rat tyrosine aminotransferase gene is associated with multiple binding sites for C/EBP and a novel liver-specific nuclear factor

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PubMed Central

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27 September 2017

Specific interactions of the wing domains of FOXA1 transcription factor with DNA.

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PubMed Central

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30 May 2018

Binding of the winged-helix transcription factor HNF3 to a linker histone site on the nucleosome.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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30 May 2018

p53 linear diffusion along DNA requires its C terminus

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PubMed Central

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28 November 2018

Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes.

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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28 November 2018

Transcription factor FoxA (HNF3) on a nucleosome at an enhancer complex in liver chromatin.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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28 November 2018

Repressive and restrictive mesodermal interactions with gut endoderm: possible relation to Meckel's Diverticulum.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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28 November 2018

An early developmental transcription factor complex that is more stable on nucleosome core particles than on free DNA.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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28 November 2018

GATA transcription factors as potentiators of gut endoderm differentiation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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28 November 2018

Hepatic specification of the gut endoderm in vitro: cell signaling and transcriptional control.

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

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28 November 2018

An active tissue-specific enhancer and bound transcription factors existing in a precisely positioned nucleosomal array.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2666343

retrieved

28 November 2018

Identifiers

DOI

10.1101/GAD.1775509

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4789676

OpenCitations bibliographic resource ID

4789676

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4789676

PMC publication ID

2666343

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4789676

PubMed publication ID

19339686

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4789676

ResearchGate publication ID

24251367

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