Phylogenetic analysis of Sec7-domain-containing Arf nucleotide exchangers (Q24610396)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14742722%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

title

Phylogenetic analysis of Sec7-domain-containing Arf nucleotide exchangers (English)

1 reference

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17 November 2019

0 references

1 reference

1 reference

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17 November 2019

Nava Segev

1 reference

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17 November 2019

Randal Cox

1 reference

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17 November 2019

Roberta J Mason-Gamer

series ordinal

1 reference

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17 November 2019

language of work or name

English

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publication date

23 January 2004

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Molecular Biology of the Cell

17 November 2019

published in

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17 November 2019

volume

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17 November 2019

issue

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17 November 2019

page(s)

1487-1505

1 reference

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ADP-ribosylation factor/COPI-dependent events at the endoplasmic reticulum-Golgi interface are regulated by the guanine nucleotide exchange factor GBF1

17 November 2019

cites work

1 reference

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Interaction of FK506-binding protein 13 with brefeldin A-inhibited guanine nucleotide-exchange protein 1 (BIG1): effects of FK506

7 April 2017

1 reference

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Protein kinase A-anchoring (AKAP) domains in brefeldin A-inhibited guanine nucleotide-exchange protein 2 (BIG2)

7 April 2017

1 reference

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Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence

7 April 2017

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Arf, Arl, Arp and Sar proteins: a family of GTP-binding proteins with a structural device for 'front-back' communication

7 April 2017

1 reference

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GBF1, a guanine nucleotide exchange factor for ADP-ribosylation factors, is localized to the cis-Golgi and involved in membrane association of the COPI coat

7 April 2017

1 reference

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Cybr, a cytokine-inducible protein that binds cytohesin-1 and regulates its activity

7 April 2017

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Annotating the human proteome: the Human Proteome Survey Database (HumanPSD) and an in-depth target database for G protein-coupled receptors (GPCR-PD) from Incyte Genomics

7 April 2017

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Initial sequencing and analysis of the human genome

7 April 2017

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ARF-GEP(100), a guanine nucleotide-exchange protein for ADP-ribosylation factor 6

7 April 2017

1 reference

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The F-box protein family.

7 April 2017

1 reference

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Signal-dependent membrane targeting by pleckstrin homology (PH) domains

7 April 2017

1 reference

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7 April 2017

1 reference

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GBF1: A novel Golgi-associated BFA-resistant guanine nucleotide exchange factor that displays specificity for ADP-ribosylation factor 5

7 April 2017

1 reference

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p200 ARF-GEP1: a Golgi-localized guanine nucleotide exchange protein whose Sec7 domain is targeted by the drug brefeldin A

7 April 2017

1 reference

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Purification and cloning of a brefeldin A-inhibited guanine nucleotide-exchange protein for ADP-ribosylation factors

7 April 2017

1 reference

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Brefeldin A acts to stabilize an abortive ARF-GDP-Sec7 domain protein complex: involvement of specific residues of the Sec7 domain

7 April 2017

1 reference

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A widely expressed betaIII spectrin associated with Golgi and cytoplasmic vesicles

7 April 2017

1 reference

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ARNO3, a Sec7-domain guanine nucleotide exchange factor for ADP ribosylation factor 1, is involved in the control of Golgi structure and function

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Solution structure of the cytohesin-1 (B2-1) Sec7 domain and its interaction with the GTPase ADP ribosylation factor 1

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

SMART, a simple modular architecture research tool: identification of signaling domains

7 April 2017

1 reference

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ARNO is a guanine nucleotide exchange factor for ADP-ribosylation factor 6

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

1 reference

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Cytohesin-1, a cytosolic guanine nucleotide-exchange protein for ADP-ribosylation factor

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

ADP-ribosylation factor is functionally and physically associated with the Golgi complex

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The genome sequence of the filamentous fungus Neurospora crassa

7 April 2017

1 reference

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The highly reduced genome of an enslaved algal nucleus

7 April 2017

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Mechanism of domain closure of Sec7 domains and role in BFA sensitivity

7 April 2017

1 reference

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Structure of the Sec7 domain of the Arf exchange factor ARNO

7 April 2017

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A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

7 April 2017

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Genome sequence of the nematode C. elegans: a platform for investigating biology

7 April 2017

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TreeView: an application to display phylogenetic trees on personal computers

7 April 2017

1 reference

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Role for Arf3p in development of polarity, but not endocytosis, in Saccharomyces cerevisiae.

7 April 2017

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A novel Golgi membrane protein is a partner of the ARF exchange factors Gea1p and Gea2p.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The ARF exchange factors Gea1p and Gea2p regulate Golgi structure and function in yeast.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The ADP ribosylation factor-nucleotide exchange factors Gea1p and Gea2p have overlapping, but not redundant functions in retrograde transport from the Golgi to the endoplasmic reticulum

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Genetic interactions in yeast between Ypt GTPases and Arf guanine nucleotide exchangers.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Brefeldin A-inhibited guanine nucleotide-exchange activity of Sec7 domain from yeast Sec7 with yeast and mammalian ADP ribosylation factors

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Nucleotide exchange on ARF mediated by yeast Gea1 protein.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

SEC12 encodes a guanine-nucleotide-exchange factor essential for transport vesicle budding from the ER.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Intracellular distribution of Arf proteins in mammalian cells. Arf6 is uniquely localized to the plasma membrane

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The N-terminal coiled coil domain of the cytohesin/ARNO family of guanine nucleotide exchange factors interacts with the scaffolding protein CASP

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Dominant-negative mutant of BIG2, an ARF-guanine nucleotide exchange factor, specifically affects membrane trafficking from the trans-Golgi network through inhibiting membrane association of AP-1 and GGA coat proteins

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Overexpression of an ADP-ribosylation factor-guanine nucleotide exchange factor, BIG2, uncouples brefeldin A-induced adaptor protein-1 coat dissociation and membrane tubulation

7 April 2017

1 reference

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beta-Arrestin-mediated ADP-ribosylation factor 6 activation and beta 2-adrenergic receptor endocytosis

7 April 2017

1 reference

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Interaction of GRASP, a protein encoded by a novel retinoic acid-induced gene, with members of the cytohesin family of guanine nucleotide exchange factors

7 April 2017

1 reference

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B2-1, a Sec7- and pleckstrin homology domain-containing protein, localizes to the Golgi complex

7 April 2017

1 reference

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Turning on ARF: the Sec7 family of guanine-nucleotide-exchange factors

7 April 2017

1 reference

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Guanine nucleotide exchange on ADP-ribosylation factors catalyzed by cytohesin-1 and its Sec7 domain

7 April 2017

1 reference

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A human exchange factor for ARF contains Sec7- and pleckstrin-homology domains

7 April 2017

1 reference

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Dominant inhibitory mutants of ARF1 block endoplasmic reticulum to Golgi transport and trigger disassembly of the Golgi apparatus

7 April 2017

1 reference

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Interaction protein for cytohesin exchange factors 1 (IPCEF1) binds cytohesin 2 and modifies its activity

7 April 2017

1 reference

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Localization of large ADP-ribosylation factor-guanine nucleotide exchange factors to different Golgi compartments: evidence for distinct functions in protein traffic

7 April 2017

1 reference

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Signaling complexes of the FERM domain-containing protein GRSP1 bound to ARF exchange factor GRP1

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Signaling by phosphoinositide-3,4,5-trisphosphate through proteins containing pleckstrin and Sec7 homology domains

7 April 2017

1 reference

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CDD: a curated Entrez database of conserved domain alignments

7 April 2017

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Recent improvements to the SMART domain-based sequence annotation resource

7 April 2017

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Structural basis for activation of ARF GTPase: mechanisms of guanine nucleotide exchange and GTP-myristoyl switching

7 April 2017

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Brefeldin A inhibits Golgi membrane-catalysed exchange of guanine nucleotide onto ARF protein

7 April 2017

1 reference

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Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes

7 April 2017

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Multiple roles for Arf6: sorting, structuring, and signaling at the plasma membrane

10 May 2017

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The Proteome Analysis database: a tool for the in silico analysis of whole proteomes

27 September 2017

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Stop codons affect 5' splice site selection by surveillance of splicing

27 September 2017

1 reference

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A bacterial guanine nucleotide exchange factor activates ARF on Legionella phagosomes

27 September 2017

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27 September 2017

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Molecular aspects of the cellular activities of ADP-ribosylation factors

27 September 2017

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Molecular determinants in pleckstrin homology domains that allow specific recognition of phosphoinositides

27 September 2017

1 reference

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Multiple roles of Arf1 GTPase in the yeast exocytic and endocytic pathways

27 September 2017

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Binding site of brefeldin A at the interface between the small G protein ADP-ribosylation factor 1 (ARF1) and the nucleotide-exchange factor Sec7 domain

27 September 2017

1 reference

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Regulators and effectors of the ARF GTPases.

27 September 2017

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The road taken: past and future foundations of membrane traffic

27 September 2017

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The PH superfold: a structural scaffold for multiple functions

27 September 2017

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Direct interaction between the ARF-specific guanine nucleotide exchange factor msec7-1 and presynaptic Munc13-1.

27 September 2017

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Distribution of ARF6 between membrane and cytosol is regulated by its GTPase cycle

27 September 2017

1 reference

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Structural basis for the inhibitory effect of brefeldin A on guanine nucleotide-exchange proteins for ADP-ribosylation factors

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The Yeast Proteome Database (YPD): a model for the organization and presentation of genome-wide functional data

27 September 2017

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ARF is required for maintenance of yeast Golgi and endosome structure and function

27 September 2017

1 reference

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Subcellular distribution and differential expression of endogenous ADP-ribosylation factor 6 in mammalian cells.

27 September 2017

1 reference

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Cloning and expression of a cDNA encoding a bovine brain brefeldin A-sensitive guanine nucleotide-exchange protein for ADP-ribosylation factor

27 September 2017

1 reference

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ADP-Ribosylation Factor 6 Regulates a Novel Plasma Membrane Recycling Pathway

27 September 2017

1 reference

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The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny.

27 September 2017

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Overexpression of wild-type and mutant ARF1 and ARF6: distinct perturbations of nonoverlapping membrane compartments.

27 September 2017

1 reference

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A regulatory role for ARF6 in receptor-mediated endocytosis

27 September 2017

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Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Functional compartments of the yeast Golgi apparatus are defined by the sec7 mutation.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The myristoylated amino terminus of ADP-ribosylation factor 1 is a phospholipid- and GTP-sensitive switch

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Endosome-specific localization and function of the ARF activator GNOM.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Specificities for the small G proteins ARF1 and ARF6 of the guanine nucleotide exchange factors ARNO and EFA6.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

A conserved domain of the arabidopsis GNOM protein mediates subunit interaction and cyclophilin 5 binding.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

EFA6, a sec7 domain-containing exchange factor for ARF6, coordinates membrane recycling and actin cytoskeleton organization

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

A glutamic finger in the guanine nucleotide exchange factor ARNO displaces Mg2+ and the beta-phosphate to destabilize GDP on ARF1.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Regulation of GRP1-catalyzed ADP ribosylation factor guanine nucleotide exchange by phosphatidylinositol 3,4,5-trisphosphate

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The number of nucleotides required to determine the branching order of three species, with special reference to the human-chimpanzee-gorilla divergence.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

A conserved C-terminal domain of EFA6-family ARF6-guanine nucleotide exchange factors induces lengthening of microvilli-like membrane protrusions.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Total synthesis of (+)-Brefeldin A.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

A point mutation in an unusual Sec7 domain is linked to brefeldin A resistance in a Plasmodium falciparum line generated by drug selection

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Brefeldin A inhibited activity of the sec7 domain of p200, a mammalian guanine nucleotide-exchange protein for ADP-ribosylation factors

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Molecules in the ARF orbit

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Activation of ADP-ribosylation factor by Golgi membranes. Evidence for a brefeldin A- and protease-sensitive activating factor on Golgi membranes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=379250

Distinct Polyphosphoinositide Binding Selectivities for Pleckstrin Homology Domains of GRP1-like Proteins Based on DiglycineVersusTriglycine Motifs

28 November 2018

1 reference

12 December 2020

1 reference

12 December 2020

Mutational analysis of Saccharomyces cerevisiae ARF1

1 reference

12 December 2020

N-terminal hydrophobic residues of the G-protein ADP-ribosylation factor-1 insert into membrane phospholipids upon GDP to GTP exchange

1 reference

12 December 2020

Coordinated Polar Localization of Auxin Efflux Carrier PIN1 by GNOM ARF GEF

1 reference

12 December 2020

Inhibition by brefeldin A of a Golgi membrane enzyme that catalyses exchange of guanine nucleotide bound to ARF

1 reference

12 December 2020

Dual interaction of ADP ribosylation factor 1 with Sec7 domain and with lipid membranes during catalysis of guanine nucleotide exchange

1 reference

12 December 2020

Structural Basis for Activation of ARF GTPase

1 reference

Crossref

https://api.crossref.org/works/10.1091%2FMBC.E03-06-0443

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1091/MBC.E03-06-0443

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14742722%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14742722%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

PubMed publication ID

14742722

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14742722%20AND%20SRC:MED&resulttype=core&format=json