Investigations on DNA intercalation and surface binding by SYBR Green I, its structure determination and methodological implications (Q24563152)

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English	Investigations on DNA intercalation and surface binding by SYBR Green I, its structure determination and methodological implications	scientific article

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title

Investigations on DNA intercalation and surface binding by SYBR Green I, its structure determination and methodological implications (English)

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author

Jürgen Bernhagen

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3

author given names

Jürgen

author last names

Bernhagen

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Jürgen Bernhagen

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PubMed

PubMed publication ID

15249599

retrieved

5 December 2023

author name string

Hubert Zipper

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1

author given names

Hubert

author last names

Zipper

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PubMed

PubMed publication ID

15249599

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5 December 2023

Herwig Brunner

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2

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Herwig

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Brunner

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PubMed

PubMed publication ID

15249599

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5 December 2023

Frank Vitzthum

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4

author given names

Frank

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Vitzthum

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PubMed

PubMed publication ID

15249599

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5 December 2023

language of work or name

English

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publication date

2004

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published in

Nucleic Acids Research

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volume

32

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issue

12

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page(s)

e103

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cites work

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The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG)

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Product differentiation by analysis of DNA melting curves during the polymerase chain reaction

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Demonstration of preferential binding of SYBR Green I to specific DNA fragments in real-time multiplex PCR

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Groove-binding unsymmetrical cyanine dyes for staining of DNA: dissociation rates in free solution and electrophoresis gels.

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Mechanisms underlying the impact of humic acids on DNA quantification by SYBR Green I and consequences for the analysis of soils and aquatic sediments

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SYBR Green real-time telomeric repeat amplification protocol for the rapid quantification of telomerase activity

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Quantifying DNA concentrations using fluorometry: a comparison of fluorophores.

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Effects of humic substances on fluorometric DNA quantification and DNA hybridization

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27 September 2017

Standardized measurements and differential spectroscopy in microplates

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27 September 2017

Magnesium increases the curvature of duplex DNA that contains dA tracts

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27 September 2017

Photophysical properties of fluorescent DNA-dyes bound to single- and double-stranded DNA in aqueous buffered solution

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Development of a mechanism-based, DNA staining protocol using SYTOX orange nucleic acid stain and DNA fragment sizing flow cytometry

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Characterization of PicoGreen reagent and development of a fluorescence-based solution assay for double-stranded DNA quantitation

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27 September 2017

SYBR Green I staining of pulsed field agarose gels is a sensitive and inexpensive way of quantitating DNA double-strand breaks in mammalian cells

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27 September 2017

Simultaneous detection of near-field topographic and fluorescence images of human chromosomes via scanning near-field optical/atomic-force microscopy (SNOAM).

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Single- and double-strand photocleavage of DNA by YO, YOYO and TOTO

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Heterodimeric DNA-binding dyes designed for energy transfer: stability and applications of the DNA complexes

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Criteria for the mode of binding of DNA binding agents.

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Investigation of DNA binding modes for a symmetrical cyanine dye trication: effect of DNA sequence and structure

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Binding of non-intercalating antibiotics to B-DNA: a theoretical study taking into account nucleic acid flexibility

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Analysis of heat-denatured DNA using native agarose gel electrophoresis

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12 December 2020

based on heuristic

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Technical considerations for the use of ethidium bromide in the quantitative analysis of nucleic acids

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reference URL

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based on heuristic

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Continuous fluorescence monitoring of rapid cycle DNA amplification

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reference URL

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12 December 2020

based on heuristic

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The interactions between the fluorescent dye thiazole orange and DNA

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12 December 2020

based on heuristic

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Detection of isozymes of deoxyribonucleases I and II on electrophoresed gels with picogram sensitivity using SYBR Green I

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reference URL

https://pubmed.ncbi.nlm.nih.gov/15249599

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12 December 2020

based on heuristic

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Effects of ethidium bromide and SYBR Green I on different polymerase chain reaction systems

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reference URL

https://pubmed.ncbi.nlm.nih.gov/15249599

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12 December 2020

based on heuristic

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Technical report: SYBR Green I and the improved sensitivity of the single-cell electrophoresis assay

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reference URL

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12 December 2020

based on heuristic

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A quantitative fluorescence-based microplate assay for the determination of double-stranded DNA using SYBR Green I and a standard ultraviolet transilluminator gel imaging system

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reference URL

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Identifiers

DOI

10.1093/NAR/GNH101

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3764811

Fatcat ID

release_o5p65bpqdna6valmxa3zw5tkrm

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OpenCitations bibliographic resource ID

3764811

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3764811

PMC publication ID

484200

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3764811

PubMed publication ID

15249599

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3764811

ResearchGate publication ID

8458929

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