Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes (Q24558319)

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English	Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes	scientific article

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title

Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes (English)

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author

Hans Ellegren

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5

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Matthew T Webster

object named as

Matthew T Webster

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2

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David W Burt

object named as

David W Burt

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4

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author name string

Erik Axelsson

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1

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Nick G C Smith

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3

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language of work or name

English

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publication date

January 2005

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published in

Genome Research

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volume

15

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issue

1

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page(s)

120-5

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cites work

Functional bias and spatial organization of genes in mutational hot and cold regions in the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Deterministic mutation rate variation in the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

GC-content evolution in mammalian genomes: the biased gene conversion hypothesis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Initial sequencing and analysis of the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Chicken microchromosomes are hyperacetylated, early replicating, and gene rich

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Mutation rates differ among regions of the mammalian genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Initial sequencing and comparative analysis of the mouse genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

PAML: a program package for phylogenetic analysis by maximum likelihood

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Selection on Human Genes as Revealed by Comparisons to Chimpanzee cDNA

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Evolution of synonymous codon usage in metazoans

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

The evolution of isochores

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

Chromosomal location effects on gene sequence evolution in mammals

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

A codon-based model of nucleotide substitution for protein-coding DNA sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

24 March 2017

A high-resolution recombination map of the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

7 April 2017

The human transcriptome map: clustering of highly expressed genes in chromosomal domains

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

7 April 2017

Genomic regionality in rates of evolution is not explained by clustering of genes of comparable expression profile

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

The fine-scale structure of recombination rate variation in the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Comparative recombination rates in the rat, mouse, and human genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Fixation biases affecting human SNPs

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Patterns of evolutionary constraints in intronic and intergenic DNA of Drosophila.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Mutation rate variation in the mammalian genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Recombination explains isochores in mammalian genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Neighboring-nucleotide effects on single nucleotide polymorphisms: a study of 2.6 million polymorphisms across the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Phylogeny of Tetraoninae and other galliform birds using mitochondrial 12S and ND2 genes.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Human SNP variability and mutation rate are higher in regions of high recombination

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Clustering of housekeeping genes provides a unified model of gene order in the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Chicken microchromosomes are hypermethylated and can be identified by specific painting probes.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

DNA methylation in health and disease

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

CpG islands of chicken are concentrated on microchromosomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

DNA synthesis errors associated with double-strand-break repair

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

27 September 2017

Rates of nucleotide substitution and mammalian nuclear gene evolution. Approximate and maximum-likelihood methods lead to different conclusions.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

30 May 2018

Gene expression, synteny, and local similarity in human noncoding mutation rates.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Male-biased mutation rate and divergence in autosomal, z-linked and w-linked introns of chicken and Turkey

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: evidence for selectively driven codon usage

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Recombination drives the evolution of GC-content in the human genome.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

A gradient of silent substitution rate in the human pseudoautosomal region.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

A unification of mosaic structures in the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

A Neutral Explanation for the Correlation of Diversity with Recombination Rates in Humans

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

High Intron Sequence Conservation Across Three Mammalian Orders Suggests Functional Constraints

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Origin and evolution of avian microchromosomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Expected relationship between the silent substitution rate and the GC content: implications for the evolution of isochores.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Local similarity in evolutionary rates extends over whole chromosomes in human-rodent and mouse-rat comparisons: implications for understanding the mechanistic basis of the male mutation bias.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

Deleterious mutations and the evolution of sex.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=540272

retrieved

28 November 2018

The dynamics of chromosome evolution in birds and mammals

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15590944

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The proteins of linked genes evolve at similar rates

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15590944

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of linkage on limits to artificial selection

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15590944

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An extended chicken karyotype, including the NOR chromosome

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15590944

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recombination and mammalian genome evolution

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15590944

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of recombination on background selection

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15590944

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GR.3021305

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PMC publication ID

540272

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PubMed publication ID

15590944

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ResearchGate publication ID

8136967

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