A computer aided thermodynamic approach for predicting the formation of Z-DNA in naturally occurring sequences (Q24531850)

3 July 2017

title

A computer aided thermodynamic approach for predicting the formation of Z-DNA in naturally occurring sequences (English)

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3 July 2017

P S Ho

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3 July 2017

M J Ellison

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3 July 2017

G J Quigley

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3 July 2017

A Rich

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3 July 2017

P.S. Ho

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M.J. Ellison

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G.J. Quigley

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A. Rich

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language of work or name

English

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publication date

1 October 1986

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3 July 2017

October 1986

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published in

The EMBO Journal

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3 July 2017

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3 July 2017

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3 July 2017

page(s)

2737-2744

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Molecular structure of a left-handed double helical DNA fragment at atomic resolution

3 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Energetics of B-to-Z transition in DNA.

24 March 2017

1 reference

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Left-handed DNA: from synthetic polymers to chromosomes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

The chemistry and biology of left-handed Z-DNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Different Z DNA forming sequences are revealed in phi X174 RFI by high resolution darkfield immuno-electron microscopy

27 September 2017

1 reference

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Salt-induced co-operative conformational change of a synthetic DNA: Equilibrium and kinetic studies with poly(dG-dC)

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Anti-Z-DNA antibody binding can stabilize Z-DNA in relaxed and linear plasmids under physiological conditions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Transition of a cloned d(AT)n-d(AT)n tract to a cruciform in vivo.

27 September 2017

1 reference

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Concordance of experimentally mapped or predicted Z-DNA sites with positions of selected alternating purine-pyrimidine tracts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Sequence-dependent energetics of the B-Z transition in supercoiled DNA containing nonalternating purine-pyrimidine sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Diethyl pyrocarbonate: a chemical probe for secondary structure in negatively supercoiled DNA.

27 September 2017

1 reference

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Site-specific cleavage of left-handed DNA in pBR322 by lambda-tris(diphenylphenanthroline)cobalt(III).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Crystal structure of Z-DNA without an alternating purine-pyrimidine sequence

27 September 2017

1 reference

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Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers

27 September 2017

1 reference

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Conformational fluctuations of DNA helix

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Torsional stress induces left-handed helical stretches in DNA of natural base sequence: circular dichroism and antibody binding

27 September 2017

1 reference

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Left-handed Z-DNA regions are present in negatively supercoiled bacteriophage PM2 DNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Electron microscopy of SV40 DNA cross-linked by anti-Z DNA IgG.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Chemical probes of DNA conformation: detection of Z-DNA at nucleotide resolution.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

A structural transition in d(AT)n.d(AT)n inserts within superhelical DNA.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1167176

Left-handed Z form in superhelical DNA: a theoretical study.

19 June 2018

1 reference

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Negatively supercoiled simian virus 40 DNA contains Z-DNA segments within transcriptional enhancer sequences

29 November 2018

1 reference

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Homologous pairing of DNA molecules by Ustilago rec1 protein is promoted by sequences of Z-DNA

29 November 2018

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12 December 2020

Natural occurrence of left-handed (Z) regions in PM2 DNA

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12 December 2020

Nucleoside conformations: an analysis of steric barriers to rotation about the glycosidic bond

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12 December 2020

Left-handed double helical DNA: variations in the backbone conformation

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12 December 2020

Structure of a B-DNA dodecamer. III. Geometry of hydration

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12 December 2020

Left-handed Z-DNA is induced by supercoiling in physiological ionic conditions

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12 December 2020

Negatively supercoiled plasmids contain left-handed Z-DNA segments as detected by specific antibody binding

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12 December 2020

Facile transition of poly[d(TG)·d(CA)] into a left-handed helix in physiological conditions

1 reference

12 December 2020

Immunoglobulin recognition of synthetic and natural left-handed Z DNA conformations and sequences

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12 December 2020

Left-handed DNA and the synaptic pairing reaction promoted by Ustilago rec1 protein

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12 December 2020

A structural basis for S1 nuclease sensitivity of double-stranded DNA

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12 December 2020

Z-DNA forms without an alternating purine-pyrimidine sequence in solution

1 reference

12 December 2020

Facile cruciform formation by an (A-T)34 sequence from a Xenopus globin gene

1 reference

12 December 2020

An assessment of the Z-DNA forming potential of alternating dA-dT stretches in supercoiled plasmids

1 reference

12 December 2020

10.1002/J.1460-2075.1986.TB04558.X

Identifiers

DOI

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OpenCitations bibliographic resource ID

4650045

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4650045

1 reference