The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems (Q24522472)

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English	The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems	scientific article

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instance of

scholarly article

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review article

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Europe PubMed Central

title

The G x U wobble base pair. A fundamental building block of RNA structure crucial to RNA function in diverse biological systems (English)

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author name string

G Varani

series ordinal

1

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W H McClain

series ordinal

2

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language of work or name

English

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publication date

July 2000

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published in

EMBO Reports

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volume

1

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issue

1

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page(s)

18-23

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cites work

Structure of yeast phenylalanine transfer RNA at 2.5 A resolution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

A sulfate pocket formed by three GoU pairs in the 0.97 A resolution X-ray structure of a nonameric RNA.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Crystal structure of a hepatitis delta virus ribozyme

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Structure of the acceptor stem of Escherichia coli tRNA Ala: role of the G3.U70 base pair in synthetase recognition

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Investigation of the structural basis for thermodynamic stabilities of tandem GU mismatches: solution structure of (rGAGGUCUC)2 by two-dimensional NMR and simulated annealing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Structure of the P1 Helix from Group I Self-splicing Introns

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Class II aminoacyl transfer RNA synthetases: crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

STRUCTURE OF A RIBONUCLEIC ACID

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

24 March 2017

Compilation of tRNA sequences and sequences of tRNA genes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

7 April 2017

On the wobble GoU and related pairs

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Non-Watson-Crick base pairs in RNA-protein recognition

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

The relationship of thermodynamic stability at a G x U recognition site to tRNA aminoacylation specificity

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Correlation of deformability at a tRNA recognition site and aminoacylation specificity

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

RNAs that bind and change the permeability of phospholipid membranes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Identification in a pseudoknot of a U.G motif essential for the regulation of the expression of ribosomal protein S15

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Metal-binding sites in the major groove of a large ribozyme domain

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

An RNA structure involved in feedback regulation of splicing and of translation is critical for biological fitness

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Core sequences and a cleavage site wobble pair required for HDV antigenomic ribozyme self-cleavage

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Antideterminants present in minihelix(Sec) hinder its recognition by prokaryotic elongation factor Tu.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Catalytic role of 2'-hydroxyl groups within a group II intron active site

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Exocyclic amine of the conserved G.U pair at the cleavage site of the Tetrahymena ribozyme contributes to 5'-splice site selection and transition state stabilization

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Proton NMR studies of manganese ion binding to tRNA-derived acceptor arm duplexes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Replacement of the conserved G.U with a G-C pair at the cleavage site of the Tetrahymena ribozyme decreases binding, reactivity, and fidelity

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Divalent metal ion binding to a conserved wobble pair defining the upstream site of cleavage of group I self-splicing introns

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Minor groove recognition of the conserved G.U pair at the Tetrahymena ribozyme reaction site

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Ribozymes: A Distinct Class of Metalloenzymes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Catalytically critical nucleotide in domain 5 of a group II intron

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Two group I introns with a C.G basepair at the 5' splice-site instead of the very highly conserved U.G basepair: is selection post-translational?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Codon--anticodon pairing: the wobble hypothesis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

RNA structure, not sequence, determines the 5' splice-site specificity of a group I intron

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Improved predictions of secondary structures for RNA

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

Structural domains of transfer RNA molecules

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

27 September 2017

A tiny RNA that catalyzes both aminoacyl-RNA and peptidyl-RNA synthesis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

30 May 2018

Ribozyme catalysis from the major groove of group II intron domain 5.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

30 May 2018

Changing the identity of a tRNA by introducing a G-U wobble pair near the 3' acceptor end.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FEMBO-REPORTS%2FKVD001

retrieved

21 January 2018

Small RNA-divalent domains.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

29 November 2018

G.U base pairing motifs in ribosomal RNA.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1083677

retrieved

29 November 2018

A simple structural feature is a major determinant of the identity of a transfer RNA

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FEMBO-REPORTS%2FKVD001

retrieved

21 January 2018

Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FEMBO-REPORTS%2FKVD001

retrieved

21 January 2018

Functional evidence for indirect recognition of G.U in tRNA(Ala) by alanyl-tRNA synthetase

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11256617

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The reliability of in vivo structure-function analysis of tRNA aminoacylation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11256617

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystallographic refinement of yeast aspartic acid transfer RNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11256617

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Specificity for aminoacylation of an RNA helix: an unpaired, exocyclic amino group in the minor groove

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/11256617

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/EMBO-REPORTS/KVD001

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

25742

OpenCitations bibliographic resource ID

25742

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

25742

PMC publication ID

1083677

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

25742

PubMed publication ID

11256617

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

25742

ResearchGate publication ID

12075243

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