Splicing factors stimulate polyadenylation via USEs at non-canonical 3' end formation signals (Q24489623)

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29 December 2019

title

Splicing factors stimulate polyadenylation via USEs at non-canonical 3' end formation signals (English)

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29 December 2019

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29 December 2019

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29 December 2019

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29 December 2019

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29 December 2019

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Andreas E Kulozik

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29 December 2019

Sven Danckwardt

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29 December 2019

Isabelle Kaufmann

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29 December 2019

Anne-Susan Gantzert

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29 December 2019

Niels H Gehring

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29 December 2019

Gabriele Neu-Yilik

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29 December 2019

Walter Keller

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29 December 2019

language of work or name

English

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publication date

26 April 2007

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29 December 2019

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29 December 2019

volume

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issue

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29 December 2019

page(s)

2658-2669

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An interaction between U2AF 65 and CF I(m) links the splicing and 3' end processing machineries

29 December 2019

cites work

1 reference

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Analysis of a noncanonical poly(A) site reveals a tripartite mechanism for vertebrate poly(A) site recognition

19 March 2017

1 reference

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Alternative polyadenylation of cyclooxygenase-2.

19 March 2017

1 reference

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Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

19 March 2017

1 reference

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Human Fip1 is a subunit of CPSF that binds to U-rich RNA elements and stimulates poly(A) polymerase

19 March 2017

1 reference

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Association of polyadenylation cleavage factor I with U1 snRNP

19 March 2017

1 reference

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Sequence determinants in human polyadenylation site selection

19 March 2017

1 reference

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Splicing and transcription-associated proteins PSF and p54nrb/nonO bind to the RNA polymerase II CTD

19 March 2017

1 reference

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SRm160 splicing coactivator promotes transcript 3'-end cleavage

19 March 2017

1 reference

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Human pre-mRNA cleavage factor II(m) contains homologs of yeast proteins and bridges two other cleavage factors

19 March 2017

1 reference

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The snRNP-free U1A (SF-A) complex(es): identification of the largest subunit as PSF, the polypyrimidine-tract binding protein-associated splicing factor

19 March 2017

1 reference

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Evidence that polyadenylation factor CPSF-73 is the mRNA 3' processing endonuclease.

19 March 2017

1 reference

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The 3'-end-processing factor CPSF is required for the splicing of single-intron pre-mRNAs in vivo

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

An evolutionarily conserved role for SRm160 in 3'-end processing that functions independently of exon junction complex formation

19 March 2017

1 reference

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Alternative polyadenylation events contribute to the induction of NF-ATc in effector T cells

19 March 2017

1 reference

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The polyadenylation factor CstF-64 regulates alternative processing of IgM heavy chain pre-mRNA during B cell differentiation

19 March 2017

1 reference

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Integrating mRNA processing with transcription

19 March 2017

1 reference

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Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis

19 March 2017

1 reference

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An extensive network of coupling among gene expression machines

19 March 2017

1 reference

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RNA polymerase II and the integration of nuclear events

7 April 2017

1 reference

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Mechanism and regulation of mRNA polyadenylation

7 April 2017

1 reference

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Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins

7 April 2017

1 reference

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The prothrombin 20209 C-->T mutation in Jewish-Moroccan Caucasians: molecular analysis of gain-of-function of 3' end processing

7 April 2017

1 reference

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3' end processing of the prothrombin mRNA in thrombophilia

27 September 2017

1 reference

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p54nrb is a component of the snRNP-free U1A (SF-A) complex that promotes pre-mRNA cleavage during polyadenylation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Eukaryotic mRNA 3' processing: a common means to different ends

27 September 2017

1 reference

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Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo

27 September 2017

1 reference

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Computational analysis of 3'-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat

27 September 2017

1 reference

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The mRNA cap-binding protein eIF4E in post-transcriptional gene expression

27 September 2017

1 reference

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p54(nrb) associates with the 5' splice site within large transcription/splicing complexes.

27 September 2017

1 reference

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Reversible cross-linking combined with immunoprecipitation to study RNA-protein interactions in vivo

27 September 2017

1 reference

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Recruitment of a basal polyadenylation factor by the upstream sequence element of the human lamin B2 polyadenylation signal.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

The carboxyl terminus of vertebrate poly(A) polymerase interacts with U2AF 65 to couple 3'-end processing and splicing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Last but not least: regulated poly(A) tail formation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

The upstream sequence element of the C2 complement poly(A) signal activates mRNA 3' end formation by two distinct mechanisms.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Alternative poly(A) site selection in complex transcription units: means to an end?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

RNA structure is a critical determinant of poly(A) site recognition by cleavage and polyadenylation specificity factor

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Complex alternative RNA processing generates an unexpected diversity of poly(A) polymerase isoforms

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Association with terminal exons in pre-mRNAs: a new role for the U1 snRNP?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

A comparison of mammalian and yeast pre-mRNA 3'-end processing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

A novel function for the U2AF 65 splicing factor in promoting pre-mRNA 3'-end processing.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Direct interactions between subunits of CPSF and the U2 snRNP contribute to the coupling of pre-mRNA 3' end processing and splicing.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

The prothrombin 3'end formation signal reveals a unique architecture that is sensitive to thrombophilic gain-of-function mutations

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Increased efficiency of mRNA 3′ end formation: a new genetic mechanism contributing to hereditary thrombophilia

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1888663

Upstream elements present in the 3'-untranslated region of collagen genes influence the processing efficiency of overlapping polyadenylation signals

29 November 2018

1 reference

12 December 2020

In vitro polyadenylation is stimulated by the presence of an upstream intron

1 reference

12 December 2020

The human U1A snRNP protein regulates polyadenylation via a direct interaction with poly(A) polymerase

1 reference

12 December 2020

CPSF recognition of an HIV-1 mRNA 3'-processing enhancer: multiple sequence contacts involved in poly(A) site definition

1 reference

12 December 2020

Interaction between the U1 snRNP-A protein and the 160-kD subunit of cleavage-polyadenylation specificity factor increases polyadenylation efficiency in vitro

1 reference

12 December 2020

The polyadenylation factor CPSF-73 is involved in histone-pre-mRNA processing

1 reference

12 December 2020

Identifiers

DOI

10.1038/SJ.EMBOJ.7601699

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17464285%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference

2 references

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29 December 2019

PubMed publication ID

17464285

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17464285%20AND%20SRC:MED&resulttype=core&format=json