Crystal structure of a Josephin-ubiquitin complex: evolutionary restraints on ataxin-3 deubiquitinating activity (Q24310046)

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Crystal Structure of a Josephin-Ubiquitin Complex: EVOLUTIONARY RESTRAINTS ON ATAXIN-3 DEUBIQUITINATING ACTIVITY

Language	Label	Description	Also known as
English	Crystal structure of a Josephin-ubiquitin complex: evolutionary restraints on ataxin-3 deubiquitinating activity	scientific article	Crystal Structure of a Josephin-Ubiquitin Complex: EVOLUTIONARY RESTRAINTS ON ATAXIN-3 DEUBIQUITINATING ACTIVITY

Statements

scholarly article

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Crystal structure of a Josephin-ubiquitin complex: evolutionary restraints on ataxin-3 deubiquitinating activity (English)

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crystal structure

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Josephin domain containing 2

1 reference

GOA release 2020-03-11

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GOA release 2020-03-11

protein deubiquitination

1 reference

GOA release 2020-03-11

author name string

Stephen D Weeks

1

author given names

Stephen D

author last names

Weeks

1 reference

PubMed publication ID

20 October 2023

Kimberly C Grasty

2

author given names

Kimberly C

author last names

Grasty

1 reference

PubMed publication ID

20 October 2023

Lisa Hernandez-Cuebas

3

author given names

Lisa

author last names

Hernandez-Cuebas

1 reference

PubMed publication ID

20 October 2023

Patrick J Loll

4

author given names

Patrick J

author last names

Loll

1 reference

PubMed publication ID

20 October 2023

language of work or name

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publication date

11 February 2011

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Journal of Biological Chemistry

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286

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6

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4555-65

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Ubiquitination directly enhances activity of the deubiquitinating enzyme ataxin-3

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Ataxin-3 interactions with rad23 and valosin-containing protein and its associations with ubiquitin chains and the proteasome are consistent with a role in ubiquitin-mediated proteolysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Structural basis for the specificity of ubiquitin C-terminal hydrolases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Features and development of Coot

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Protein production by auto-induction in high density shaking cultures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

The ubiquitin system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Improved R-factors for diffraction data analysis in macromolecular crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Breaking the chains: structure and function of the deubiquitinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Proteasome-independent functions of ubiquitin in endocytosis and signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Mechanism and function of deubiquitinating enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Polyubiquitin chains: polymeric protein signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

CAG expansions in a novel gene for Machado-Joseph disease at chromosome 14q32.1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

Inactivation of the mouse Atxn3 (ataxin-3) gene increases protein ubiquitination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

19 March 2017

dbEST--database for "expressed sequence tags"

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

7 April 2017

Ubiquitin-binding domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

7 April 2017

Ubiquitin-binding domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

7 April 2017

Activity and cellular functions of the deubiquitinating enzyme and polyglutamine disease protein ataxin-3 are regulated by ubiquitination at lysine 117.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Understanding the role of the Josephin domain in the PolyUb binding and cleavage properties of ataxin-3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Silencing ataxin-3 mitigates degeneration in a rat model of Machado-Joseph disease: no role for wild-type ataxin-3?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Polyglutamine-induced neurodegeneration in SCA3 is not mitigated by non-expanded ataxin-3: conclusions from double-transgenic mouse models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Protein partners of deubiquitinating enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

The deubiquitinating enzyme ataxin-3, a polyglutamine disease protein, edits Lys63 linkages in mixed linkage ubiquitin chains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Cellular turnover of the polyglutamine disease protein ataxin-3 is regulated by its catalytic activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Deubiquitination in virus infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Deubiquitinating function of ataxin-3: insights from the solution structure of the Josephin domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Defining the role of ubiquitin-interacting motifs in the polyglutamine disease protein, ataxin-3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

The solution structure of the Josephin domain of ataxin-3: structural determinants for molecular recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

The polyglutamine neurodegenerative protein ataxin 3 regulates aggresome formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

The polyglutamine neurodegenerative protein ataxin-3 binds polyubiquitylated proteins and has ubiquitin protease activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Contribution of the glutamine 19 side chain to transition-state stabilization in the oxyanion hole of papain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

27 September 2017

Ataxin-3 suppresses polyglutamine neurodegeneration in Drosophila by a ubiquitin-associated mechanism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

30 May 2018

Elucidation of ataxin-3 and ataxin-7 function by integrative bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3039388

30 May 2018

Josephin domain-containing proteins from a variety of species are active de-ubiquitination enzymes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Domain architecture of the polyglutamine protein ataxin-3: a globular domain followed by a flexible tail

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Ligation independent cloning vectors for expression of SUMO fusions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Controlled synthesis of polyubiquitin chains

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Mechanism-based proteomics tools based on ubiquitin and ubiquitin-like proteins: synthesis of active site-directed probes.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Structure validation of the Josephin domain of ataxin-3: conclusive evidence for an open conformation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Josephin domain of ataxin-3 contains two distinct ubiquitin-binding sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Microbatch crystallization under oil — a new technique allowing many small-volume crystallization trials

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

Structural and functional analysis of the Josephin domain of the polyglutamine protein ataxin-3

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

NEDD8: A new ataxin-3 interactor

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.177360

21 January 2018

A novel NMR method for determining the interfaces of large protein-protein complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/21118805

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modification of the electrostatic environment is tolerated in the oxyanion hole of the cysteine protease papain

1 reference

https://pubmed.ncbi.nlm.nih.gov/21118805

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Hydrophobic Effect Contributes to Polyubiquitin Chain Recognition

1 reference

https://pubmed.ncbi.nlm.nih.gov/21118805

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M110.177360

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release_n7cwn7ordbfp5dv6uaq5wrz46q

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PMC publication ID

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PubMed publication ID

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ResearchGate publication ID

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