Pages that link to "Q47940190"

The following pages link to Thermodynamics of unpaired terminal nucleotides on short RNA helixes correlates with stacking at helix termini in larger RNAs. (Q47940190):

Displaying 32 items.

• Base-stacking and base-pairing contributions into thermal stability of the DNA double helix (Q22065979) (← links)
• Control of branch-site choice by a group II intron (Q24535991) (← links)
• NMR Structures of (rGC U GA G GCU) 2 and (rGC G GA U GCU) 2 :  Probing the Structural Features That Shape the Thermodynamic Stability of GA Pairs † , ‡ (Q27643745) (← links)
• Stacking Effects on Local Structure in RNA:  Changes in the Structure of Tandem GA Pairs when Flanking GC Pairs Are Replaced by isoG−isoC Pairs † (Q27644368) (← links)
• NMR structure of a 4 x 4 nucleotide RNA internal loop from an R2 retrotransposon: Identification of a three purine-purine sheared pair motif and comparison to MC-SYM predictions (Q27670924) (← links)
• Novel Conformation of an RNA Structural Switch (Q27675017) (← links)
• Stacking in RNA: NMR of Four Tetramers Benchmark Molecular Dynamics (Q29299984) (← links)
• Enhanced NMR signal detection of imino protons in RNA molecules containing 3' dangling nucleotides. (Q31146610) (← links)
• Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction (Q34066468) (← links)
• The nuclear magnetic resonance of CCCC RNA reveals a right-handed helix, and revised parameters for AMBER force field torsions improve structural predictions from molecular dynamics (Q34320707) (← links)
• Contribution of the intercalated adenosine at the helical junction to the stability of the gag-pro frameshifting pseudoknot from mouse mammary tumor virus (Q34362504) (← links)
• Alternative designs for construction of the class II transfer RNA tertiary core (Q34363160) (← links)
• Intrinsic flexibility of snRNA hairpin loops facilitates protein binding (Q34421636) (← links)
• Contributions of stacking, preorganization, and hydrogen bonding to the thermodynamic stability of duplexes between RNA and 2'-O-methyl RNA with locked nucleic acids (Q34543881) (← links)
• Dynamic motions of the HIV-1 frameshift site RNA. (Q35050637) (← links)
• Predicting helical coaxial stacking in RNA multibranch loops (Q35847218) (← links)
• A computational study of expanded heterocyclic nucleosides in DNA. (Q36994990) (← links)
• Capturing RNA Folding Free Energy with Coarse-Grained Molecular Dynamics Simulations (Q37744021) (← links)
• An innate twist between Crick's wobble and Watson-Crick base pairs (Q38122143) (← links)
• A 5'-cap for DNA probes binding RNA target strands (Q38331760) (← links)
• Importance of discriminator base stacking interactions: molecular dynamics analysis of A73 microhelix(Ala) variants. (Q39543132) (← links)
• The thermodynamic stability of RNA duplexes and hairpins containing N6-alkyladenosines and 2-methylthio-N6-alkyladenosines (Q39808545) (← links)
• Stacking Free Energies of All DNA and RNA Nucleoside Pairs and Dinucleoside-Monophosphates Computed Using Recently Revised AMBER Parameters and Compared with Experiment (Q40315523) (← links)
• The NMR structure of an internal loop from 23S ribosomal RNA differs from its structure in crystals of 50s ribosomal subunits (Q41184696) (← links)
• RNA Tetraloop Folding Reveals Tension between Backbone Restraints and Molecular Interactions (Q42931258) (← links)
• The influence of various modified nucleotides placed as 3'-dangling end on thermal stability of RNA duplexes (Q44017985) (← links)
• Analysis of the pi-pi stacking interactions between the aminoglycoside antibiotic kinase APH(3')-IIIa and its nucleotide ligands (Q44225415) (← links)
• Shape-selective RNA recognition by cysteinyl-tRNA synthetase (Q44985382) (← links)
• Physics-based all-atom modeling of RNA energetics and structure (Q47722829) (← links)
• Nuclear Magnetic Resonance Structure of an 8 × 8 Nucleotide RNA Internal Loop Flanked on Each Side by Three Watson-Crick Pairs and Comparison to Three-Dimensional Predictions (Q48139090) (← links)
• Surprising Sequence Effects on GU Closure of Symmetric 2 × 2 Nucleotide RNA Internal Loops. (Q52640655) (← links)
• Structural Studies of the 3',3'-cGAMP Riboswitch Induced by Cognate and Noncognate Ligands Using Molecular Dynamics Simulation (Q59793625) (← links)