Plant SET domain-containing proteins: structure, function and regulation (Q36826687)

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scientific article published on 12 April 2007

Language	Label	Description	Also known as
English	Plant SET domain-containing proteins: structure, function and regulation	scientific article published on 12 April 2007

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

1 reference

Europe PubMed Central

Plant SET domain-containing proteins: structure, function and regulation (English)

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

author name string

Danny W-K Ng

1

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Tao Wang

2

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Mahesh B Chandrasekharan

3

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Rodolfo Aramayo

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Sunee Kertbundit

5

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Timothy C Hall

6

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

language of work or name

0 references

publication date

12 April 2007

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Europe PubMed Central

PMC publication ID

16 August 2017

number of pages

14

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based on heuristic

inferred from page(s)

Biochimica et Biophysica Acta

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

1769

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

5-6

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

316-329

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

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Silencing by plant Polycomb-group genes requires dispersed trimethylation of histone H3 at lysine 27.

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Partially redundant functions of two SET-domain polycomb-group proteins in controlling initiation of seed development in Arabidopsis

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The control of histone lysine methylation in epigenetic regulation

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Different Polycomb group complexes regulate common target genes in Arabidopsis.

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The Universal Protein Resource (UniProt): an expanding universe of protein information

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The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4

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The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes

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COMPASS: a complex of proteins associated with a trithorax-related SET domain protein

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Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails

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Translating the Histone Code

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Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly

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Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate-dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis

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Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

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Histone acetylation: lessons from the plant kingdom

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Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Regulation of chromatin structure by site-specific histone H3 methyltransferases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Histone acetylation and an epigenetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Review: chromatin structural features and targets that regulate transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

A Drosophila ESC-E(Z) protein complex is distinct from other polycomb group complexes and contains covalently modified ESC

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Self-association of the SET domains of human ALL-1 and of Drosophila TRITHORAX and ASH1 proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The language of covalent histone modifications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Stabilization of chromatin structure by PRC1, a Polycomb complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

beta-Phaseolin gene activation is a two-step process: PvALF- facilitated chromatin modification followed by abscisic acid-mediated gene activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Chromatin silencing and Arabidopsis development: A role for polycomb proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Tsix, a gene antisense to Xist at the X-inactivation centre

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Genes controlling fertilization-independent seed development in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The C-terminal SET domains of ALL-1 and TRITHORAX interact with the INI1 and SNR1 proteins, components of the SWI/SNF complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Association of SET domain and myotubularin-related proteins modulates growth control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Multiple imprinted sense and antisense transcripts, differential methylation and tandem repeats in a putative imprinting control region upstream of mouse Igf2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Crystal structure of the nucleosome core particle at 2.8 Å resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The Drosophila Polycomb-group gene Enhancer of zeste contains a region with sequence similarity to trithorax

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Molecular genetic analysis of the Drosophila melanogaster gene absent, small or homeotic discs1 (ash1).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Sequences responsible for intracellular localization of beta-actin messenger RNA also affect cell phenotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The protein encoded by the Drosophila position-effect variegation suppressor gene Su(var)3-9 combines domains of antagonistic regulators of homeotic gene complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The PHD finger: implications for chromatin-mediated transcriptional regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

PvAlf, an embryo-specific acidic transcriptional activator enhances gene expression from phaseolin and phytohemagglutinin promoters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Chromatin Structure: A Repeating Unit of Histones and DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Mutation in a heterochromatin-specific chromosomal protein is associated with suppression of position-effect variegation in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The trithorax gene, a trans-acting regulator of the bithorax complex in Drosophila, encodes a protein with zinc-binding domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The t(4;11) chromosome translocation of human acute leukemias fuses the ALL-1 gene, related to Drosophila trithorax, to the AF-4 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Involvement of a homolog of Drosophila trithorax by 11q23 chromosomal translocations in acute leukemias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

The bromodomain: a conserved sequence found in human, Drosophila and yeast proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

brahma: a regulator of Drosophila homeotic genes structurally related to the yeast transcriptional activator SNF2/SWI2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Electron microscopic and biochemical evidence that chromatin structure is a repeating unit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Electron microscopy of defined lengths of chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

29 September 2017

Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

Two genes become one: the genes encoding heterochromatin protein Su(var)3-9 and translation initiation factor subunit eIF-2gamma are joined to a dicistronic unit in holometabolic insects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

A region in the 3' UTR of MnSOD RNA enhances translation of a heterologous RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

Mutations in FIE, a WD polycomb group gene, allow endosperm development without fertilization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

The histone tails of the nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

Histone acetylation: chromatin in action

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

Alternative splicing of fosB transcripts results in differentially expressed mRNAs encoding functionally antagonistic proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

27 June 2018

Two cell-cycle regulated SET-domain proteins interact with proliferating cell nuclear antigen (PCNA) in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Ordered histone modifications are associated with transcriptional poising and activation of the phaseolin promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Prevention of early flowering by expression of FLOWERING LOCUS C requires methylation of histone H3 K36.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Molecular characterization of the tobacco SET domain protein NtSET1 unravels its role in histone methylation, chromatin binding, and segregation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

The 5' UTR negatively regulates quantitative and spatial expression from the ABI3 promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Developmental and cell-specific expression of ZWICHEL is regulated by the intron and exon sequences of its gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

FIE and CURLY LEAF polycomb proteins interact in the regulation of homeobox gene expression during sporophyte development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Modulation of heat shock gene expression by the TAC1 chromatin-modifying complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

A POLYCOMB group gene of rice (Oryza sativa L. subspecies indica), OsiEZ1, codes for a nuclear-localized protein expressed preferentially in young seedlings and during reproductive development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

ATX-1, an Arabidopsis homolog of trithorax, activates flower homeotic genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Sequence relationships, conserved domains, and expression patterns for maize homologs of the polycomb group genes E(z), esc, and E(Pc).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

NtSET1, a member of a newly identified subgroup of plant SET-domain-containing proteins, is chromatin-associated and its ectopic overexpression inhibits tobacco plant growth.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Trithorax and dCBP acting in a complex to maintain expression of a homeotic gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Reconstitution of a functional core polycomb repressive complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Interaction of the Arabidopsis polycomb group proteins FIE and MEA mediates their common phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Rubisco small and large subunit N-methyltransferases. Bi- and mono-functional methyltransferases that methylate the small and large subunits of Rubisco

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

A Polycomb-group gene regulates homeotic gene expression in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

The extra sex combs product contains WD40 repeats and its time of action implies a role distinct from other Polycomb group products

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

5 September 2018

Regulation of flowering time by Arabidopsis MSI1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2794661

4 December 2018

OsSET1, a novel SET-domain-containing gene from rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polycomb group complexes self-regulate imprinting of the Polycomb group gene MEDEA in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of human fibroblast growth factor 2 mRNA is post-transcriptionally controlled by a unique destabilizing element present in the 3'-untranslated region between alternative polyadenylation sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetics and biochemistry of secondary metabolites in plants: an evolutionary perspective

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of the kinase activity of the MIK GCK-like MAP4K by alternative splicing

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intron-regulated expression of SUVH3, an Arabidopsis Su(var)3-9 homologue

1 reference

https://pubmed.ncbi.nlm.nih.gov/17512990

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.BBAEXP.2007.04.003

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

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