Ambiguous distance data in the calculation of NMR structures (Q36878828)

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scientific article published on January 1997

Language	Label	Description	Also known as
English	Ambiguous distance data in the calculation of NMR structures	scientific article published on January 1997

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

1 reference

Europe PubMed Central

Ambiguous distance data in the calculation of NMR structures (English)

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

author name string

Nilges M

1

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Europe PubMed Central

PubMed publication ID

16 August 2017

publication date

1 January 1997

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

Folding & design

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

2

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

S53-7

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

Computational challenges for macromolecular structure determination by X-ray crystallography and solution NMR-spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS1359-0278%2897%2900064-3

7 January 2021

based on heuristic

inferred from DOI database lookup

Distance geometry.

1 reference

https://api.crossref.org/works/10.1016%2FS1359-0278%2897%2900064-3

7 January 2021

based on heuristic

inferred from DOI database lookup

An evaluation of computational strategies for use in the determination of protein structure from distance constraints obtained by nuclear magnetic resonance.

1 reference

https://api.crossref.org/works/10.1016%2FS1359-0278%2897%2900064-3

7 January 2021

based on heuristic

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Distance geometry and related methods for protein structure determination from NMR data

1 reference

https://api.crossref.org/works/10.1016%2FS1359-0278%2897%2900064-3

7 January 2021

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Improved efficiency of protein structure calculations from NMR data using the program DIANA with redundant dihedral angle constraints.

1 reference

https://api.crossref.org/works/10.1016%2FS1359-0278%2897%2900064-3

7 January 2021

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Protein folding by restrained energy minimization and molecular dynamics

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7 January 2021

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A protein structure from nuclear magnetic resonance data. lac repressor headpiece

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Solution conformation of a heptadecapeptide comprising the DNA binding helix F of the cyclic AMP receptor protein of Escherichia coli. Combined use of 1H nuclear magnetic resonance and restrained molecular dynamics.

1 reference

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Three-dimensional structure of proteins determined by molecular dynamics with interproton distance restraints: application to crambin

1 reference

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Determination of three-dimensional structures of proteins from interproton distance data by hybrid distance geometry-dynamical simulated annealing calculations

1 reference

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Determination of three-dimensional structures of proteins by simulated annealing with interproton distance restraints. Application to crambin, potato carboxypeptidase inhibitor and barley serine proteinase inhibitor 2.

1 reference

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Determination of three-dimensional structures of proteins from interproton distance data by dynamical simulated annealing from a random array of atoms. Circumventing problems associated with folding

1 reference

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A reduced representation of proteins for use in restraint satisfaction calculations

1 reference

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A calculation strategy for the structure determination of symmetric dimers by 1H NMR.

1 reference

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Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities.

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A structure refinement method based on molecular dynamics in four spatial dimensions.

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Intrinsic nature of the three-dimensional structure of proteins as determined by distance geometry with good sampling properties.

1 reference

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Torsion angle dynamics: reduced variable conformational sampling enhances crystallographic structure refinement

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Torsion-angle molecular dynamics as a new efficient tool for NMR structure calculation.

1 reference

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Automated assignment of simulated and experimental NOESY spectra of proteins by feedback filtering and self-correcting distance geometry

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A computer-based protocol for semiautomated assignments and 3D structure determination of proteins

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7 January 2021

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Application of distance geometry to the proton assignment problem.

1 reference

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Protein three-dimensional structure determination and sequence-specific assignment of 13C and 15N-separated NOE data. A novel real-space ab initio approach

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Relaxation matrix refinement of the solution structure of squash trypsin inhibitor

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Structure of the dsRNA binding domain of E. coli RNase III.

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The solution structure of the Tyr41-->His mutant of the single-stranded DNA binding protein encoded by gene V of the filamentous bacteriophage M13.

1 reference

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Solution structure of the tetrameric minimum transforming domain of p53

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Solution structure of a cellulose-binding domain from Cellulomonas fimi by nuclear magnetic resonance spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS1359-0278%2897%2900064-3

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A model of the complex between single-stranded DNA and the single-stranded DNA binding protein encoded by gene V of filamentous bacteriophage M13.

1 reference

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7 January 2021

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Sequence-specific 1H NMR assignments and secondary structure in solution of Escherichia coli trp repressor

1 reference

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Pattern recognition and self-correcting distance geometry calculations applied to myohemerythrin.

1 reference

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7 January 2021

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Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin

1 reference

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Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome

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Structure of the binding site for inositol phosphates in a PH domain

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Stereochemical quality of protein structure coordinates

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7 January 2021

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Recognition of errors in three-dimensional structures of proteins

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Crystallographic R factor refinement by molecular dynamics

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Identifiers

10.1016/S1359-0278(97)00064-3

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

16 August 2017

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