Principles of regulatory information conservation between mouse and human (Q35128631)

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scientific article

Language	Label	Description	Also known as
English	Principles of regulatory information conservation between mouse and human	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

6 August 2017

Principles of regulatory information conservation between mouse and human (English)

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6 August 2017

Vasavi Sundaram

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Vasavi Sundaram

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Alan P Boyle

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Anshul Kundaje

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Axel Visel

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Ross C Hardison

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Robert M Samstein

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mouse ENCODE Consortium

20

2 references

ORCID Public Data File 2021

https://static-content.springer.com/esm/art%3A10.1038%2Fnature13985/MediaObjects/41586_2014_BFnature13985_MOESM102_ESM.pdf

7 March 2023

Len A. Pennacchio

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Len A Pennacchio

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Trupti Kawli

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Europe PubMed Central

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6 August 2017

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Zhiping Weng

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6 August 2017

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Xinqiong Yang

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6 August 2017

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Nergiz Dogan

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6 August 2017

author name string

Yong Cheng

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6 August 2017

Zhihai Ma

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6 August 2017

Bong-Hyun Kim

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6 August 2017

Weisheng Wu

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6 August 2017

Philip Cayting

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6 August 2017

Xiaoyun Xing

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6 August 2017

Jingjing Li

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6 August 2017

Ghia Euskirchen

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6 August 2017

Shin Lin

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6 August 2017

Yiing Lin

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6 August 2017

Dorrelyn Patacsil

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6 August 2017

Cheryl A Keller

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6 August 2017

Belinda Giardine

19

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6 August 2017

mouse ENCODE Consortium

20

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6 August 2017

Ting Wang

22

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6 August 2017

Michael P Snyder

26

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6 August 2017

language of work or name

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publication date

1 November 2014

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6 August 2017

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6 August 2017

515

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6 August 2017

7527

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6 August 2017

371-375

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6 August 2017

Genome-wide comparative analysis reveals human-mouse regulatory landscape and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Widespread contribution of transposable elements to the innovation of gene regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Sin3: insight into its transcription regulatory functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Cooperativity and rapid evolution of cobound transcription factors in closely related mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Annotation of functional variation in personal genomes using RegulomeDB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

ChromHMM: automating chromatin-state discovery and characterization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Variation in transcription factor binding among humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

ChIP-seq accurately predicts tissue-specific activity of enhancers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Divergence of transcription factor binding sites across related yeast species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

VISTA Enhancer Browser--a database of tissue-specific human enhancers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Distribution and intensity of constraint in mammalian genomic sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Of mice and not men: differences between mouse and human immunology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Activation of beta-major globin gene transcription is associated with recruitment of NF-E2 to the beta-globin LCR and gene promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Genomic strategies to identify mammalian regulatory sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

Nuclease hypersensitive sites in chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

28 July 2018

DNA hypomethylation within specific transposable element families associates with tissue-specific enhancer landscape

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

CTCF and cohesin: linking gene regulatory elements with their targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

A map of the cis-regulatory sequences in the mouse genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

Transposable elements have rewired the core regulatory network of human embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

Design and analysis of ChIP-seq experiments for DNA-binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

A molecular basis for species differences in Thy-1 expression patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4343047

27 September 2018

A comparative encyclopedia of DNA elements in the mouse genome

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13985

7 January 2021

based on heuristic

inferred from DOI database lookup

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13985

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1038/NATURE13985

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

2014Natur.515..371C

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

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