Large-scale modelling of the divergent spectrin repeats in nesprins: giant modular proteins (Q34721188)

4 August 2017

title

Large-scale modelling of the divergent spectrin repeats in nesprins: giant modular proteins (English)

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4 August 2017

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4 August 2017

Flavia Autore

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4 August 2017

Mark Pfuhl

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4 August 2017

Xueping Quan

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4 August 2017

Aisling Williams

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4 August 2017

Catherine M Shanahan

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4 August 2017

Franca Fraternali

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4 August 2017

publication date

6 May 2013

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4 August 2017

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4 August 2017

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4 August 2017

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4 August 2017

page(s)

e63633

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Multiple novel nesprin-1 and nesprin-2 variants act as versatile tissue-specific intracellular scaffolds

4 August 2017

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Nesprins: intracellular scaffolds that maintain cell architecture and coordinate cell function?

7 July 2018

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7 July 2018

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7 July 2018

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Spectrin, alpha-actinin, and dystrophin

7 July 2018

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7 July 2018

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Nesprin-2 is a multi-isomeric protein that binds lamin and emerin at the nuclear envelope and forms a subcellular network in skeletal muscle

7 July 2018

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Nesprin-1alpha contributes to the targeting of mAKAP to the cardiac myocyte nuclear envelope

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Stabilities of folding of clustered, two-repeat fragments of spectrin reveal a potential hinge in the human erythroid spectrin tetramer

7 July 2018

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7 July 2018

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Solution structural studies on human erythrocyte alpha-spectrin tetramerization site

7 July 2018

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Nesprin-1alpha self-associates and binds directly to emerin and lamin A in vitro

7 July 2018

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7 July 2018

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7 July 2018

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Myne-1, a spectrin repeat transmembrane protein of the myocyte inner nuclear membrane, interacts with lamin A/C

7 July 2018

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Nesprins: a novel family of spectrin-repeat-containing proteins that localize to the nuclear membrane in multiple tissues

7 July 2018

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Crystal structure of the alpha-actinin rod reveals an extensive torsional twist

7 July 2018

1 reference

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Syne-1, a dystrophin- and Klarsicht-related protein associated with synaptic nuclei at the neuromuscular junction

7 July 2018

1 reference

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Utrophin lacks the rod domain actin binding activity of dystrophin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

Structure of the alpha-actinin rod: molecular basis for cross-linking of actin filaments

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

Structures of two repeats of spectrin suggest models of flexibility

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

Twilight zone of protein sequence alignments

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

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7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

7 July 2018

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20 VERIFY3D: Assessment of protein models with three-dimensional profiles

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

Solution structure of the spectrin repeat: a left-handed antiparallel triple-helical coiled-coil

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

The spectrin repeat folds into a three-helix bundle in solution.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

VMD: visual molecular dynamics

7 July 2018

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Crystal structure of the repetitive segments of spectrin

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

Comparative protein modelling by satisfaction of spatial restraints

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3646009

Essential dynamics of proteins

7 July 2018

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SCOP: a structural classification of proteins database for the investigation of sequences and structures

7 July 2018

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

7 July 2018

1 reference

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Basic local alignment search tool

7 July 2018

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Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

7 July 2018

1 reference

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Identification of spectrin-like repeats required for high affinity utrophin-actin interaction

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

Conformational stabilities of the structural repeats of erythroid spectrin and their functional implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

Molecular extensibility of mini-dystrophins and a dystrophin rod construct

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

Structural organization of the nine spectrin repeats of Kalirin

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

Structural insights into the stability and flexibility of unusual erythroid spectrin repeats

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

3DCoffee: combining protein sequences and structures within multiple sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

A 3-D reconstruction of smooth muscle alpha-actinin by CryoEm reveals two different conformations at the actin-binding region

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

1H, 13C and 15N resonance assignments of the third spectrin repeat of alpha-actinin-4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain α-Spectrin

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0063633

10.1371/JOURNAL.PONE.0063633

21 January 2018

Identifiers

DOI

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4 August 2017

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4 August 2017

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