Insights into Eukaryotic Translation Initiation from Mass Spectrometry of Macromolecular Protein Assemblies (Q26779741)

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Phosphopeptide fragmentation and analysis by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Evolution and functional cross-talk of protein post-translational modifications

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Analytical strategies for phosphoproteomics

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Chemical cross-linkers for protein structure studies by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Studying macromolecular complex stoichiometries by peptide-based mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Structure of full-length p53 tumor suppressor probed by chemical cross-linking and mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Protein and polymer analyses up tom/z 100 000 by laser ionization time-of-flight mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Intramolecular cross-linking experiments on cytochrome c and ribonuclease A using an isotope multiplet method.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Analyzing the Protein Assembly and Dynamics of the Human Spliceosome with SILAC

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Quantitative mass spectrometry-based proteomics: an overview

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Quantitative mass spectrometry in proteomics: a critical review

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Investigation of protein-protein interactions in living cells by chemical crosslinking and mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

StavroX--a software for analyzing crosslinked products in protein interaction studies

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Reliable identification of cross-linked products in protein interaction studies by 13C-labeled p-benzoylphenylalanine

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Matrix-assisted ultraviolet laser desorption of non-volatile compounds

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The phosphoproteomics data explosion.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Recent mechanistic insights into eukaryotic ribosomes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Regulation of translation initiation in eukaryotes: mechanisms and biological targets

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Systematic functional prioritization of protein posttranslational modifications

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Molecular architecture of the 40S⋅eIF1⋅eIF3 translation initiation complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Hsp70 forms antiparallel dimers stabilized by post-translational modifications to position clients for transfer to Hsp90.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The quaternary organization and dynamics of the molecular chaperone HSP26 are thermally regulated.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Topological models of heteromeric protein assemblies from mass spectrometry: application to the yeast eIF3:eIF5 complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Distinct regions of human eIF3 are sufficient for binding to the HCV IRES and the 40S ribosomal subunit

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Investigation of protein–RNA interactions by mass spectrometry—Techniques and applications

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

(14)N(15)N DXMSMS Match program for the automated analysis of LC/ESI-MS/MS crosslinking data from experiments using (15)N metabolically labeled proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Twenty years of gas phase structural biology.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

eIF3: a versatile scaffold for translation initiation complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Ribosome structure and the mechanism of translation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

1 reference

7 January 2021

A tandem mass spectrometer for improved transmission and analysis of large macromolecular assemblies.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Phosphorylation of serine 51 in initiation factor 2 alpha (eIF2 alpha) promotes complex formation between eIF2 alpha(P) and eIF2B and causes inhibition in the guanine nucleotide exchange activity of eIF2B.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Database search algorithm for identification of intact cross-links in proteins and peptides using tandem mass spectrometry.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Factors involved in initiation of haemoglobin synthesis can be phosphorylated in vitro

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Insulin-dependent stimulation of protein synthesis by phosphorylation of a regulator of 5'-cap function

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

eIF2 interactions with initiator tRNA and eIF2B are regulated by post-translational modifications and conformational dynamics

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Evolution of the protein stoichiometry in the L12 stalk of bacterial and organellar ribosomes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Comparative cross-linking and mass spectrometry of an intact F-type ATPase suggest a role for phosphorylation.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

eIF2B is a decameric guanine nucleotide exchange factor with a γ2ε2 tetrameric core

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Identification of cross-linked peptides from large sequence databases

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Identification of cross-linked peptides from complex samples.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

High-sensitivity Orbitrap mass analysis of intact macromolecular assemblies

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

A mass spectrometry-based hybrid method for structural modeling of protein complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Determining the stoichiometry and interactions of macromolecular assemblies from mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

A comparative cross-linking strategy to probe conformational changes in protein complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The ABC's (and XYZ's) of peptide sequencing

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Interpreting the protein language using proteomics.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Analysis of protein complexes using mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The mechanism of eukaryotic translation initiation and principles of its regulation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The growing landscape of lysine acetylation links metabolism and cell signalling

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

A mechanistic overview of translation initiation in eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

An eIF5/eIF2 complex antagonizes guanine nucleotide exchange by eIF2B during translation initiation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The emerging role of MS in structure elucidation of protein-nucleic acid complexes.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Does phosphorylation of the cap-binding protein eIF4E play a role in translation initiation?

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Striking multiplicity of eIF4E-BP1 phosphorylated isoforms identified by 2D gel electrophoresis regulation by heat shock

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Heptameric (L12)6/L10 rather than canonical pentameric complexes are found by tandem MS of intact ribosomes from thermophilic bacteria.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

High-resolution mass spectrometry of viral assemblies: molecular composition and stability of dimorphic hepatitis B virus capsids.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Unbiased RNA-protein interaction screen by quantitative proteomics.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Quaternary dynamics and plasticity underlie small heat shock protein chaperone function

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Heterogeneity and dynamics in the assembly of the heat shock protein 90 chaperone complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Detection and selective dissociation of intact ribosomes in a mass spectrometer

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Phosphorylation of eukaryotic protein synthesis initiation factor 4E at Ser-209

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Serine 209, not serine 53, is the major site of phosphorylation in initiation factor eIF-4E in serum-treated Chinese hamster ovary cells

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Complex formation by all five homologues of mammalian translation initiation factor 3 subunits from yeast Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

A novel role of the mammalian GSPT/eRF3 associating with poly(A)-binding protein in Cap/Poly(A)-dependent translation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Characterization of an Antagonist Interleukin-6 Dimer by Stable Isotope Labeling, Cross-linking, and Mass Spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Mass spectrometry of ribosomes from Saccharomyces cerevisiae: implications for assembly of the stalk complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Mass spectrometry defines the stoichiometry of ribosomal stalk complexes across the phylogenetic tree

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

A multidimensional chromatography technology for in-depth phosphoproteome analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Analysis of the subunit organization of the eIF2B complex reveals new insights into its structure and regulation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

eIF2 independently binds two distinct eIF2B subcomplexes that catalyze and regulate guanine-nucleotide exchange.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Mass spectrometric analysis of the human 40S ribosomal subunit: native and HCV IRES-bound complexes

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Dynamic protein ligand interactions--insights from MS.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Advances in protein complex analysis using mass spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Hepatitis C virus IRES RNA-induced changes in the conformation of the 40s ribosomal subunit

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Structural roles for human translation factor eIF3 in initiation of protein synthesis

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Mass spectrometry of intact V-type ATPases reveals bound lipids and the effects of nucleotide binding

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The structure of the eukaryotic ribosome at 3.0 Å resolution

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Structural Probing of a Protein Phosphatase 2A Network by Chemical Cross-Linking and Mass Spectrometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Molecular architecture of a eukaryotic translational initiation complex

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Electrospray ionization for mass spectrometry of large biomolecules

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

PHAS-I as a link between mitogen-activated protein kinase and translation initiation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

A novel mechanism for the control of translation initiation by amino acids, mediated by phosphorylation of eukaryotic initiation factor 2B.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Homologous segments in three subunits of the guanine nucleotide exchange factor eIF2B mediate translational regulation by phosphorylation of eIF2.

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Identification of a translation initiation factor 3 (eIF3) core complex, conserved in yeast and mammals, that interacts with eIF5

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Multiple mechanisms control phosphorylation of PHAS-I in five (S/T)P sites that govern translational repression

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Tight binding of the phosphorylated alpha subunit of initiation factor 2 (eIF2alpha) to the regulatory subunits of guanine nucleotide exchange factor eIF2B is required for inhibition of translation initiation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Phosphorylation of eukaryotic translation initiation factor 4E is critical for growth

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Novel insights into the architecture and protein interaction network of yeast eIF3

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Cross-link guided molecular modeling with ROSETTA

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021

Phosphorylation stoichiometries of human eukaryotic initiation factors

1 reference

https://api.crossref.org/works/10.1016%2FJ.JMB.2015.10.011

7 January 2021