Gapped BLAST and PSI-BLAST: a new generation of protein database search programs (Q24545170)

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Language	Label	Description	Also known as
English	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs	scientific article

Statements

instance of

scholarly article

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title

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs (English)

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author

David J. Lipman

series ordinal

7

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Webb Miller

series ordinal

6

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author name string

S F Altschul

series ordinal

1

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T L Madden

series ordinal

2

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A A Schäffer

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3

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J Zhang

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4

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Z Zhang

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5

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original language of film or TV show

English

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publication date

1 September 1997

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published in

Nucleic Acids Research

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volume

25

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issue

17

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page(s)

3389-3402

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cites work

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The FHIT gene, spanning the chromosome 3p14.2 fragile site and renal carcinoma-associated t(3;8) breakpoint, is abnormal in digestive tract cancers

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Applications and statistics for multiple high-scoring segments in molecular sequences

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Profile analysis: detection of distantly related proteins

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Improved tools for biological sequence comparison

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24 March 2017

Identifying protein-binding sites from unaligned DNA fragments

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Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

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Amino acid substitution matrices from protein blocks

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Basic local alignment search tool

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Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

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Identification of common molecular subsequences

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24 March 2017

A general method applicable to the search for similarities in the amino acid sequence of two proteins

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Isolation, characterization, and inactivation of the APA1 gene encoding yeast diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase

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A strong candidate for the breast and ovarian cancer susceptibility gene BRCA1

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24 March 2017

Prediction of the coding sequences of unidentified human genes. VI. The coding sequences of 80 new genes (KIAA0201-KIAA0280) deduced by analysis of cDNA clones from cell line KG-1 and brain

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Insertional mutagenesis in zebrafish identifies two novel genes, pescadillo and dead eye, essential for embryonic development

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Rapid similarity searches of nucleic acid and protein data banks

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24 March 2017

Sequence Analysis of the Genome of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803. II. Sequence Determination of the Entire Genome and Assignment of Potential Protein-coding Regions

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2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans

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A superfamily of conserved domains in DNA damage-responsive cell cycle checkpoint proteins

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7 April 2017

From BRCA1 to RAP1: a widespread BRCT module closely associated with DNA repair

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7 April 2017

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

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7 April 2017

Information content of binding sites on nucleotide sequences

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PubMed Central

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7 April 2017

Database of homology-derived protein structures and the structural meaning of sequence alignment

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PubMed Central

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7 April 2017

Optimal sequence alignments

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=146917

retrieved

10 May 2017

Identifiers

DOI

10.1093/NAR/25.17.3389

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OpenCitations bibliographic resource ID

58354

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stated in

OpenCitations Corpus

PMC publication ID

146917

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PubMed publication ID

9254694

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