Analysis of rat cardiac myocytes and fibroblasts identifies combinatorial enhancer organization and transcription factor families. (Q50112002)

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scientific article published on 5 February 2018

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English	Analysis of rat cardiac myocytes and fibroblasts identifies combinatorial enhancer organization and transcription factor families.	scientific article published on 5 February 2018

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15 March 2020

Analysis of rat cardiac myocytes and fibroblasts identifies combinatorial enhancer organization and transcription factor families (English)

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15 March 2020

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15 March 2020

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15 March 2020

author name string

Tal Golan-Lagziel

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15 March 2020

Yair E Lewis

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15 March 2020

Guy Douvdevany

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15 March 2020

Lilac H Caspi

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15 March 2020

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5 February 2018

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15 March 2020

Journal of Molecular and Cellular Cardiology

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15 March 2020

116

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15 March 2020

91-105

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15 March 2020

Transcriptional control of cardiac fibroblast plasticity

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Origin, development, and differentiation of cardiac fibroblasts

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View from the heart: cardiac fibroblasts in development, scarring and regeneration

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Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution

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Transcription factors: from enhancer binding to developmental control

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Gene regulatory networks in the evolution and development of the heart

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A transcription factor collective defines cardiac cell fate and reflects lineage history

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7 January 2021

Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart.

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ChIP-Seq identification of weakly conserved heart enhancers

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Large-scale discovery of enhancers from human heart tissue

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Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage

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Genome-wide analysis of histone marks identifying an epigenetic signature of promoters and enhancers underlying cardiac hypertrophy.

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Genome-Wide Temporal Profiling of Transcriptome and Open Chromatin of Early Cardiomyocyte Differentiation Derived From hiPSCs and hESCs

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Inhibition of phenylephrine induced hypertrophy in rat neonatal cardiomyocytes by the mitochondrial KATP channel opener diazoxide

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ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide

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Cutadapt removes adapter sequences from high-throughput sequencing reads

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

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Identifying ChIP-seq enrichment using MACS.

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

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HTSeq--a Python framework to work with high-throughput sequencing data

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

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High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

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RBM20 Regulates Circular RNA Production From the Titin Gene.

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Chromatin accessibility: a window into the genome

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7 January 2021

The accessible chromatin landscape of the human genome

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7 January 2021

A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters

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Master transcription factors and mediator establish super-enhancers at key cell identity genes

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7 January 2021

Super-enhancers delineate disease-associated regulatory nodes in T cells

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7 January 2021

Chromatin remodeling effects on enhancer activity

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7 January 2021

A unique chromatin signature uncovers early developmental enhancers in humans

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Complex Interdependence Regulates Heterotypic Transcription Factor Distribution and Coordinates Cardiogenesis

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The nuclear receptor ERRalpha is required for the bioenergetic and functional adaptation to cardiac pressure overload.

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10.1016/J.YJMCC.2018.02.003

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29421235%20AND%20SRC:MED&resulttype=core&format=json

15 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29421235%20AND%20SRC:MED&resulttype=core&format=json

15 March 2020

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