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The Jalview Java alignment editor.
Clamp M, Cuff J, Searle SM, Barton GJ. Clamp M, et al. Bioinformatics. 2004 Feb 12;20(3):426-7. doi: 10.1093/bioinformatics/btg430. Epub 2004 Jan 22. Bioinformatics. 2004. PMID: 14960472
JPred: a consensus secondary structure prediction server.
Cuff JA, Clamp ME, Siddiqui AS, Finlay M, Barton GJ. Cuff JA, et al. Among authors: clamp me. Bioinformatics. 1998;14(10):892-3. doi: 10.1093/bioinformatics/14.10.892. Bioinformatics. 1998. PMID: 9927721
Apollo: a sequence annotation editor.
Lewis SE, Searle SM, Harris N, Gibson M, Lyer V, Richter J, Wiel C, Bayraktaroglu L, Birney E, Crosby MA, Kaminker JS, Matthews BB, Prochnik SE, Smithy CD, Tupy JL, Rubin GM, Misra S, Mungall CJ, Clamp ME. Lewis SE, et al. Among authors: clamp me. Genome Biol. 2002;3(12):RESEARCH0082. doi: 10.1186/gb-2002-3-12-research0082. Epub 2002 Dec 23. Genome Biol. 2002. PMID: 12537571 Free PMC article. Review.
Ensembl 2004.
Birney E, Andrews D, Bevan P, Caccamo M, Cameron G, Chen Y, Clarke L, Coates G, Cox T, Cuff J, Curwen V, Cutts T, Down T, Durbin R, Eyras E, Fernandez-Suarez XM, Gane P, Gibbins B, Gilbert J, Hammond M, Hotz H, Iyer V, Kahari A, Jekosch K, Kasprzyk A, Keefe D, Keenan S, Lehvaslaiho H, McVicker G, Melsopp C, Meidl P, Mongin E, Pettett R, Potter S, Proctor G, Rae M, Searle S, Slater G, Smedley D, Smith J, Spooner W, Stabenau A, Stalker J, Storey R, Ureta-Vidal A, Woodwark C, Clamp M, Hubbard T. Birney E, et al. Among authors: clamp m. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D468-70. doi: 10.1093/nar/gkh038. Nucleic Acids Res. 2004. PMID: 14681459 Free PMC article.
The Ensembl automatic gene annotation system.
Curwen V, Eyras E, Andrews TD, Clarke L, Mongin E, Searle SM, Clamp M. Curwen V, et al. Among authors: clamp m. Genome Res. 2004 May;14(5):942-50. doi: 10.1101/gr.1858004. Genome Res. 2004. PMID: 15123590 Free PMC article.
Ensembl 2002: accommodating comparative genomics.
Clamp M, Andrews D, Barker D, Bevan P, Cameron G, Chen Y, Clark L, Cox T, Cuff J, Curwen V, Down T, Durbin R, Eyras E, Gilbert J, Hammond M, Hubbard T, Kasprzyk A, Keefe D, Lehvaslaiho H, Iyer V, Melsopp C, Mongin E, Pettett R, Potter S, Rust A, Schmidt E, Searle S, Slater G, Smith J, Spooner W, Stabenau A, Stalker J, Stupka E, Ureta-Vidal A, Vastrik I, Birney E. Clamp M, et al. Nucleic Acids Res. 2003 Jan 1;31(1):38-42. doi: 10.1093/nar/gkg083. Nucleic Acids Res. 2003. PMID: 12519943 Free PMC article.
An overview of Ensembl.
Birney E, Andrews TD, Bevan P, Caccamo M, Chen Y, Clarke L, Coates G, Cuff J, Curwen V, Cutts T, Down T, Eyras E, Fernandez-Suarez XM, Gane P, Gibbins B, Gilbert J, Hammond M, Hotz HR, Iyer V, Jekosch K, Kahari A, Kasprzyk A, Keefe D, Keenan S, Lehvaslaiho H, McVicker G, Melsopp C, Meidl P, Mongin E, Pettett R, Potter S, Proctor G, Rae M, Searle S, Slater G, Smedley D, Smith J, Spooner W, Stabenau A, Stalker J, Storey R, Ureta-Vidal A, Woodwark KC, Cameron G, Durbin R, Cox A, Hubbard T, Clamp M. Birney E, et al. Among authors: clamp m. Genome Res. 2004 May;14(5):925-8. doi: 10.1101/gr.1860604. Epub 2004 Apr 12. Genome Res. 2004. PMID: 15078858 Free PMC article. Review.
60 results