(Q38858040)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

review article

1 reference

title

The evolution of genome mining in microbes - a review (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Mohammad Alanjary

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

publication date

8 June 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

published in

Natural Product Reports

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

page(s)

988-1005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

Natural products: a continuing source of novel drug leads

12 March 2020

cites work

1 reference

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Natural products as sources of new drugs over the 30 years from 1981 to 2010

21 January 2018

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Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species

21 January 2018

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Actinorhodin is a chromosomally-determined antibiotic in Streptomyces coelicolar A3(2)

21 January 2018

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Genetic studies of avermectin biosynthesis in Streptomyces avermitilis

21 January 2018

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Identification of Streptomyces violaceoruber Tü22 genes involved in the biosynthesis of granaticin

21 January 2018

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Exploiting the genetic potential of polyketide producing streptomycetes

21 January 2018

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Modular organization of genes required for complex polyketide biosynthesis

21 January 2018

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Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)

21 January 2018

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Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis

21 January 2018

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PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin

21 January 2018

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Cloning of genes involved in erythromycin biosynthesis from Saccharopolyspora erythraea using a novel actinomycete-Escherichia coli cosmid

21 January 2018

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Stable propagation of cosmid sized human DNA inserts in an F factor based vector

21 January 2018

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Enzymatic assembly of DNA molecules up to several hundred kilobases

21 January 2018

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Direct cloning and refactoring of a silent lipopeptide biosynthetic gene cluster yields the antibiotic taromycin A.

21 January 2018

1 reference

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DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

21 January 2018

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CRISPR-Cas9 Based Engineering of Actinomycetal Genomes

21 January 2018

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A genomics-guided approach for discovering and expressing cryptic metabolic pathways.

21 January 2018

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The genomisotopic approach: a systematic method to isolate products of orphan biosynthetic gene clusters

21 January 2018

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The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity

21 January 2018

1 reference

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antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A mass spectrometry-guided genome mining approach for natural product peptidogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Natural product proteomining, a quantitative proteomics platform, allows rapid discovery of biosynthetic gene clusters for different classes of natural products

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The comprehensive antibiotic resistance database.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of Thiotetronic Acid Antibiotic Biosynthetic Pathways by Target-directed Genome Mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Elucidation of the zinc-dependent regulation in Amycolatopsis japonicum enabled the identification of the ethylenediamine-disuccinate ([S,S]-EDDS) genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

eSNaPD: a versatile, web-based bioinformatics platform for surveying and mining natural product biosynthetic diversity from metagenomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Cyanobacteria as a source of natural products

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Myxobacteria: proficient producers of novel natural products with various biological activities--past and future biotechnological aspects with the focus on the genus Sorangium

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Myxobacteria--'microbial factories' for the production of bioactive secondary metabolites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Anaerobic bacteria as producers of antibiotics

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A genomic approach to the cryptic secondary metabolome of the anaerobic world

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Minimum Information about a Biosynthetic Gene cluster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Basic local alignment search tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Fast and sensitive protein alignment using DIAMOND

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

HMMER web server: interactive sequence similarity searching

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A new antibiotic kills pathogens without detectable resistance

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome mining and genetic analysis of cypemycin biosynthesis reveal an unusual class of posttranslationally modified peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Microbisporicin gene cluster reveals unusual features of lantibiotic biosynthesis in actinomycetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Overproduction of Ristomycin A by activation of a silent gene cluster in Amycolatopsis japonicum MG417-CF17.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Ribosomal synthesis of tricyclic depsipeptides in bloom-forming cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Systematic unravelling of the biosynthesis of poly (L-diaminopropionic acid) in Streptomyces albulus PD-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

BAGEL: a web-based bacteriocin genome mining tool.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

CLUSEAN: a computer-based framework for the automated analysis of bacterial secondary metabolite biosynthetic gene clusters

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The secondary metabolite bioinformatics portal: Computational tools to facilitate synthetic biology of secondary metabolite production.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Bioinformatics tools for genome mining of polyketide and non-ribosomal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Recent advances in genome-based polyketide discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Computational approaches to natural product discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Antimicrobials, drug discovery, and genome mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Using Genomics for Natural Product Structure Elucidation

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

In silico tools for the analysis of antibiotic biosynthetic pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Recent advances in genome mining of secondary metabolite biosynthetic gene clusters and the development of heterologous expression systems in Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Automated genome mining for natural products.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

NRPSpredictor2--a web server for predicting NRPS adenylation domain specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Automated identification of depsipeptide natural products by an informatic search algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

BAGEL2: mining for bacteriocins in genomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Enediynes: Exploration of microbial genomics to discover new anticancer drug leads.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Microbial genomics as a guide to drug discovery and structural elucidation: ECO-02301, a novel antifungal agent, as an example.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

An iterative nonribosomal peptide synthetase assembles the pyrrole-amide antibiotic congocidine in Streptomyces ambofaciens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Organization of the biosynthetic gene cluster for the macrolide antibiotic spiramycin in Streptomyces ambofaciens

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of a bioactive 51-membered macrolide complex by activation of a silent polyketide synthase in Streptomyces ambofaciens

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

SEARCHPKS: A program for detection and analysis of polyketide synthase domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome-Directed Lead Discovery: Biosynthesis, Structure Elucidation, and Biological Evaluation of Two Families of Polyene Macrolactams against Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A polyketide synthase-peptide synthetase gene cluster from an uncultured bacterial symbiont of Paederus beetles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Biosynthesis of polyketides by trans-AT polyketide synthases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Computational identification and analysis of orphan assembly-line polyketide synthases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Exploiting the mosaic structure of trans-acyltransferase polyketide synthases for natural product discovery and pathway dissection

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Discovery of the rhizopodin biosynthetic gene cluster in Stigmatella aurantiaca Sg a15 by genome mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Metabolic and evolutionary origin of actin-binding polyketides from diverse organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Discovery of pentangular polyphenols hexaricins A-C from marine Streptosporangium sp. CGMCC 4.7309 by genome mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Mining soil metagenomes to better understand the evolution of natural product structural diversity: pentangular polyphenols as a case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Computational discovery of specificity-conferring sites in non-ribosomal peptide synthetases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Chapter 8. Methods for in silico prediction of microbial polyketide and nonribosomal peptide biosynthetic pathways from DNA sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Predicting substrate specificity of adenylation domains of nonribosomal peptide synthetases and other protein properties by latent semantic indexing

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

NRPSsp: non-ribosomal peptide synthase substrate predictor

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

MS/MS networking guided analysis of molecule and gene cluster families.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

NRPquest: Coupling Mass Spectrometry and Genome Mining for Nonribosomal Peptide Discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Assembly and clustering of natural antibiotics guides target identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Discovery of a new peptide natural product by Streptomyces coelicolor genome mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Atlas of nonribosomal peptide and polyketide biosynthetic pathways reveals common occurrence of nonmodular enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of a novel two-peptide lantibiotic, lichenicidin, following rational genome mining for LanM proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Mechanistic studies of Ser/Thr dehydration catalyzed by a member of the LanL lanthionine synthetase family

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Comparative genomics of actinomycetes with a focus on natural product biosynthetic genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The genomic landscape of ribosomal peptides containing thiazole and oxazole heterocycles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification and activation of novel biosynthetic gene clusters by genome mining in the kirromycin producer Streptomyces collinus Tü 365.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Streptocollin, a Type IV Lanthipeptide Produced by Streptomyces collinus Tü 365.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Streptomyces coelicolor as an expression host for heterologous gene clusters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Automated genome mining of ribosomal peptide natural products

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Lasso peptides: an intriguing class of bacterial natural products

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Two enzymes catalyze the maturation of a lasso peptide in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genetic analysis of plasmid determinants for microcin J25 production and immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Isolation and structural characterization of capistruin, a lasso peptide predicted from the genome sequence of Burkholderia thailandensis E264.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Unearthing the roots of the terpenome

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of the first bacterial monoterpene cyclase, a 1,8-cineole synthase, that catalyzes the direct conversion of geranyl diphosphate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification and characterization of bacterial diterpene cyclases that synthesize the cembrane skeleton.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Molecular Basis for Stellatic Acid Biosynthesis: A Genome Mining Approach for Discovery of Sesterterpene Synthases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Novel terpenes generated by heterologous expression of bacterial terpene synthase genes in an engineered Streptomyces host.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Terpene synthases are widely distributed in bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A genomic screening approach to the structure-guided identification of drug candidates from natural sources.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The molecular basis of conjugated polyyne biosynthesis in phytopathogenic bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Bacterial Genome Mining of Enzymatic Tools for Alkyne Biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Multiplexed metagenome mining using short DNA sequence tags facilitates targeted discovery of epoxyketone proteasome inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Metabolic engineering of antibiotic factories: new tools for antibiotic production in actinomycetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Detecting sequence homology at the gene cluster level with MultiGeneBlast

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Using sequence similarity networks for visualization of relationships across diverse protein superfamilies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome neighborhood network reveals insights into enediyne biosynthesis and facilitates prediction and prioritization for discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genetic evidence supports secondary metabolic diversity in Prochloron spp., the cyanobacterial symbiont of a tropical ascidian

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Linking Chemistry and Genetics in the Growing Cyanobactin Natural Products Family

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Widespread occurrence and lateral transfer of the cyanobactin biosynthesis gene cluster in cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Natural combinatorial peptide libraries in cyanobacterial symbionts of marine ascidians

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Post-translational modification in microviridin biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Leader peptide and a membrane protein scaffold guide the biosynthesis of the tricyclic peptide microviridin

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Exploiting the natural diversity of microviridin gene clusters for discovery of novel tricyclic depsipeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome mining for natural product biosynthetic gene clusters in the Subsection V cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

HUMAN MICROBIOTA. Small molecules from the human microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A roadmap for natural product discovery based on large-scale genomics and metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Structuring Microbial Metabolic Responses to Multiplexed Stimuli via Self-Organizing Metabolomics Maps

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

An Integrated Metabolomic and Genomic Mining Workflow To Uncover the Biosynthetic Potential of Bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A gene cluster containing two fungal polyketide synthases encodes the biosynthetic pathway for a polyketide, asperfuranone, in Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Type III polyketide synthase beta-ketoacyl-ACP starter unit and ethylmalonyl-CoA extender unit selectivity discovered by Streptomyces coelicolor genome mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The Novel Lipopeptide Poaeamide of the Endophyte Pseudomonas poae RE*1-1-14 Is Involved in Pathogen Suppression and Root Colonization

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

NRPS-PKS: a knowledge-based resource for analysis of NRPS/PKS megasynthases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome-based cryptic gene discovery and functional identification of NRPS siderophore peptide in Streptomyces peucetius.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome mining and metabolic profiling of the rhizosphere bacterium Pseudomonas sp. SH-C52 for antimicrobial compounds.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

SMURF: Genomic mapping of fungal secondary metabolite clusters

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Multifactorial induction of an orphan PKS-NRPS gene cluster in Aspergillus terreus

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genomic island TnSmu2 of Streptococcus mutans harbors a nonribosomal peptide synthetase-polyketide synthase gene cluster responsible for the biosynthesis of pigments involved in oxygen and H2O2 tolerance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Mutanobactin A from the human oral pathogen Streptococcus mutans is a cross-kingdom regulator of the yeast-mycelium transition

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genetic basis for the biosynthesis of the pharmaceutically important class of epoxyketone proteasome inhibitors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Caulosegnins I-III: a highly diverse group of lasso peptides derived from a single biosynthetic gene cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Methods and statistics for combining motif match scores

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Precursor-centric genome-mining approach for lasso peptide discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Lasso peptides from proteobacteria: Genome mining employing heterologous expression and mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Xanthomonins I-III: a new class of lasso peptides with a seven-residue macrolactam ring

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Chaxapeptin, a Lasso Peptide from Extremotolerant Streptomyces leeuwenhoekii Strain C58 from the Hyperarid Atacama Desert

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome mining expands the chemical diversity of the cyanobactin family to include highly modified linear peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of a new diterpene biosynthetic gene cluster that produces O-methylkolavelool in Herpetosiphon aurantiacus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

"Nothing in biology makes sense except in the light of evolution": Theodosius Dobzhansky: 1900-1975.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The evolution of gene collectives: How natural selection drives chemical innovation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Evolutionary affiliations within the superfamily of ketosynthases reflect complex pathway associations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Natural biocombinatorics in the polyketide synthase genes of the actinobacterium Streptomyces avermitilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Evolution of metabolic diversity: insights from microbial polyketide synthases

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

A systematic computational analysis of biosynthetic gene cluster evolution: lessons for engineering biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Phylogenetic methods in natural product research

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Actinomycetes from Red Sea sponges: sources for chemical and phylogenetic diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Intraspecies comparison of Streptomyces pratensis genomes reveals high levels of recombination and gene conservation between strains of disparate geographic origin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

An environmental bacterial taxon with a large and distinct metabolic repertoire

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Phylogenetic analysis and gene functional predictions: phylogenomics in action

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Phylogenomics: intersection of evolution and genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Molecular evolution of aromatic polyketides and comparative sequence analysis of polyketide ketosynthase and 16S ribosomal DNA genes from various streptomyces species

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Sequence-based analysis of secondary-metabolite biosynthesis in marine actinobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The Biogeography of Putative Microbial Antibiotic Production

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Chemical-biogeographic survey of secondary metabolism in soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Deep sequencing of non-ribosomal peptide synthetases and polyketide synthases from the microbiomes of Australian marine sponges.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Discovery and synthetic refactoring of tryptophan dimer gene clusters from the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Targeted metagenomics: finding rare tryptophan dimer natural products in the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Antibiotic resistance is ancient

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Intrinsic antibiotic resistance: mechanisms, origins, challenges and solutions

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of the novobiocin biosynthetic gene cluster of Streptomyces spheroides NCIB 11891

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Mechanisms of self-resistance in the platensimycin- and platencin-producing Streptomyces platensis MA7327 and MA7339 strains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Antibiotics. Targeting DnaN for tuberculosis therapy using novel griselimycins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identifying producers of antibacterial compounds by screening for antibiotic resistance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Antibiotic resistance-mediated isolation of scaffold-specific natural product producers

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

ARDB--Antibiotic Resistance Genes Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The regulation of the secondary metabolism of Streptomyces: new links and experimental advances

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Regulation of secondary metabolism in streptomycetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Molecular regulation of antibiotic biosynthesis in streptomyces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Increased glycopeptide production after overexpression of shikimate pathway genes being part of the balhimycin biosynthetic gene cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

2-Alkyl-4-hydroxymethylfuran-3-carboxylic acids, antibiotic production inducers discovered by Streptomyces coelicolor genome mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Activation of the SoxR regulon in Streptomyces coelicolor by the extracellular form of the pigmented antibiotic actinorhodin

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Unsuspected control of siderophore production by N-acetylglucosamine in streptomycetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The bifunctional role of aconitase in Streptomyces viridochromogenes Tü494.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

PREDetector: a new tool to identify regulatory elements in bacterial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Microbial siderophores: a mini review

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Siderophores in environmental research: roles and applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

The FUR (ferric uptake regulator) superfamily: diversity and versatility of key transcriptional regulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

IdeR in mycobacteria: from target recognition to physiological function

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

CASSIS and SMIPS: promoter-based prediction of secondary metabolite gene clusters in eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Accurate prediction of secondary metabolite gene clusters in filamentous fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

MIDDAS-M: motif-independent de novo detection of secondary metabolite gene clusters through the integration of genome sequencing and transcriptome data

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Motif-independent de novo detection of secondary metabolite gene clusters-toward identification from filamentous fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

FunGeneClusterS: Predicting fungal gene clusters from genome and transcriptome data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Origin and variation of tunicate secondary metabolites

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Genome streamlining and chemical defense in a coral reef symbiosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Identification of the putative bryostatin polyketide synthase gene cluster from "Candidatus Endobugula sertula", the uncultivated microbial symbiont of the marine bryozoan Bugula neritina

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Metagenome mining reveals polytheonamides as posttranslationally modified ribosomal peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Scaffolding of a bacterial genome using MinION nanopore sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Staphylococcus aureus Nonribosomal Peptide Secondary Metabolites Regulate Virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Molecular cloning of the whole biosynthetic pathway of a Streptomyces antibiotic and its expression in a heterologous host

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC6NP00025H

Pyranonigrin E: a PKS-NRPS hybrid metabolite from Aspergillus niger identified by genome mining

21 January 2018

1 reference

9 March 2024

https://opencitations.net/index/api/v1/citations/10.1002/CBIC.201300430

Isolation and Biosynthetic Analysis of Haliamide, a New PKS-NRPS Hybrid Metabolite from the Marine Myxobacterium Haliangium ochraceum

1 reference

12 April 2024

https://opencitations.net/index/api/v1/citations/10.3390/MOLECULES21010059

Identifiers

DOI

10.1039/C6NP00025H

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27272205%20AND%20SRC:MED&resulttype=core&format=json