(Q36756856)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

title

Role of hybrid tRNA-binding states in ribosomal translocation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

Shinichiro Shoji

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

Dongli Pan

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

Barry S Cooperman

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

Kurt Fredrick

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

language of work or name

English

0 references

publication date

30 June 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

9 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

volume

105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

page(s)

9192-9197

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states

9 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Characterization of 16S rRNA mutations that decrease the fidelity of translation initiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Structures of modified eEF2 80S ribosome complexes reveal the role of GTP hydrolysis in translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Identification of two distinct hybrid state intermediates on the ribosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Structure of the 70S ribosome complexed with mRNA and tRNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

The hybrid state of tRNA binding is an authentic translation elongation intermediate

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Destabilization of the P site codon-anticodon helix results from movement of tRNA into the P/E hybrid state within the ribosome.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Function of the ribosomal E-site: a mutagenesis study

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

tRNA dynamics on the ribosome during translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Visualization of ribosome-recycling factor on the Escherichia coli 70S ribosome: functional implications

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Locking and unlocking of ribosomal motions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Identification of molecular interactions between P-site tRNA and the ribosome essential for translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Monitoring the GAP catalyzed H-Ras GTPase reaction at atomic resolution in real time

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Interactions between 23S rRNA and tRNA in the ribosomal E site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

A ratchet-like inter-subunit reorganization of the ribosome during translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Ribosomal translocation: facts and models

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Binding of the 3' terminus of tRNA to 23S rRNA in the ribosomal exit site actively promotes translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Energetics and mechanism of actomyosin adenosine triphosphatase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Kinetically competent intermediates in the translocation step of protein synthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Elongation factor G stabilizes the hybrid-state conformation of the 70S ribosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Control of phosphate release from elongation factor G by ribosomal protein L7/12.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Intermediate states in the movement of transfer RNA in the ribosome

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

Movement of tRNA but not the nascent peptide during peptide bond formation on ribosomes

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2453706

An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation

28 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Conformational changes of the small ribosomal subunit during elongation factor G-dependent tRNA-mRNA translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Rapid kinetic analysis of EF-G-dependent mRNA translocation in the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Energetic contribution of tRNA hybrid state formation to translocation catalysis on the ribosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Accurate translocation of mRNA by the ribosome requires a peptidyl group or its analog on the tRNA moving into the 30S P site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Rapid ribosomal translocation depends on the conserved 18-55 base pair in P-site transfer RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Interactions of translational factor EF-G with the bacterial ribosome before and after mRNA translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Observation of intersubunit movement of the ribosome in solution using FRET.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Peptidyl-tRNA regulates the GTPase activity of translation factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Pi release from eIF2, not GTP hydrolysis, is the step controlled by start-site selection during eukaryotic translation initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

The mechanism of Ras GTPase activation by neurofibromin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Fourier transform infrared spectroscopy on the Rap.RapGAP reaction, GTPase activation without an arginine finger

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

EF-G-dependent GTPase on the ribosome. conformational change and fusidic acid inhibition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Recognition and positioning of mRNA in the ribosome by tRNAs with expanded anticodons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0710146105

Kinetics of ATP and inorganic phosphate release during hydrolysis of ATP by rabbit skeletal actomyosin subfragment 1. Oxygen exchange between water and ATP or phosphate

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18591673

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0710146105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

PubMed publication ID

18591673

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18591673%20AND%20SRC:MED&resulttype=core&format=json