(Q35831596)

10 August 2017

The khmer software package: enabling efficient nucleotide sequence analysis (English)

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10 August 2017

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Humberto Ortíz-Zuazaga

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En Zyme

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6 June 2020

publication date

25 September 2015

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10 August 2017

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6 June 2020

volume

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6 June 2020

page(s)

900

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Creative Commons Attribution 4.0 International

6 June 2020

start time

25 September 2015

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April 2022 Public Data File from Crossref

copyrighted

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cites work

Walking the Talk: Adopting and Adapting Sustainable Scientific Software Development processes in a Small Biology Lab

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

Channeling Community Contributions to Scientific Software: A Sprint Experience

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

Tackling soil diversity with the assembly of large, complex metagenomes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

Scaling metagenome sequence assembly with probabilistic de Bruijn graphs

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

SeqAn an efficient, generic C++ library for sequence analysis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4608353

10.12688/F1000RESEARCH.6924.1

11 July 2018

Identifiers

DOI

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6 June 2020

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6 June 2020

PubMed publication ID

26535114

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