(Q35678806)

9 August 2017

title

SubspaceEM: A fast maximum-a-posteriori algorithm for cryo-EM single particle reconstruction (English)

1 reference

cryogenic electron microscopy

9 August 2017

main subject

0 references

author name string

Nicha C Dvornek

series ordinal

1 reference

9 August 2017

Fred J Sigworth

series ordinal

1 reference

9 August 2017

Hemant D Tagare

series ordinal

1 reference

9 August 2017

publication date

31 March 2015

1 reference

Journal of Structural Biology

9 August 2017

published in

1 reference

9 August 2017

volume

190

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9 August 2017

1 reference

9 August 2017

page(s)

200-214

1 reference

Electron microscopy: Ultrastable gold substrates for electron cryomicroscopy

9 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Structure of the ribosome with elongation factor G trapped in the pretranslocation state

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

RELION: implementation of a Bayesian approach to cryo-EM structure determination

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Prevention of overfitting in cryo-EM structure determination

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

A Bayesian adaptive basis algorithm for single particle reconstruction

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

A Bayesian view on cryo-EM structure determination.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Tilt-pair analysis of images from a range of different specimens in single-particle electron cryomicroscopy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

An introduction to maximum-likelihood methods in cryo-EM.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

An adaptive Expectation-Maximization algorithm with GPU implementation for electron cryomicroscopy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

A toolbox for ab initio 3-D reconstructions in single-particle electron microscopy.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

The advent of near-atomic resolution in single-particle electron microscopy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Exact reduced-complexity maximum likelihood reconstruction of multiple 3-D objects from unlabeled unoriented 2-D projections and electron microscopy of viruses

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

FREALIGN: high-resolution refinement of single particle structures

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Fast maximum-likelihood refinement of electron microscopy images

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Maximum-likelihood multi-reference refinement for electron microscopy images

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

XMIPP: a new generation of an open-source image processing package for electron microscopy.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

UCSF Chimera--a visualization system for exploratory research and analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy

27 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

27 July 2018

https://pubmed.ncbi.nlm.nih.gov/25839831

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Disentangling conformational states of macromolecules in 3D-EM through likelihood optimization.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

A statistical approach to computer processing of cryo-electron microscope images: virion classification and 3-D reconstruction

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

An ab initio algorithm for low-resolution 3-D reconstructions from cryoelectron microscopy images

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

A maximum-likelihood approach to single-particle image refinement.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4453989

Fast, adaptive expectation-maximization alignment for Cryo-EM

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25839831

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Scree Test For The Number Of Factors

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25839831

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JSB.2015.03.009

1 reference

9 August 2017

1 reference

9 August 2017

1 reference