(Q35207483)

7 August 2017

title

LOC3D: annotate sub-cellular localization for protein structures (English)

1 reference

7 August 2017

Burkhard Rost

1 reference

7 August 2017

Rajesh Nair

1 reference

7 August 2017

language of work or name

English

0 references

publication date

1 July 2003

1 reference

7 August 2017

published in

Nucleic Acids Research

1 reference

7 August 2017

1 reference

7 August 2017

1 reference

7 August 2017

page(s)

3337-3340

1 reference

ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins

7 August 2017

cites work

1 reference

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13 July 2018

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NLSdb: database of nuclear localization signals

13 July 2018

1 reference

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Sequence conserved for subcellular localization

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

The Bioperl toolkit: Perl modules for the life sciences

13 July 2018

1 reference

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Prediction of Human Protein Function from Post-translational Modifications and Localization Features

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Finding nuclear localization signals

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Protein function in the post-genomic era.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Annotating eukaryote genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Protein sorting signals and prediction of subcellular localization

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

13 July 2018

The Protein Data Bank

1 reference

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The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Twilight zone of protein sequence alignments

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

SMART: identification and annotation of domains from signalling and extracellular protein sequences

13 July 2018

1 reference

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The PROSITE database, its status in 1999

13 July 2018

1 reference

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Predicting function: from genes to genomes and back

13 July 2018

1 reference

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Wanted: subcellular localization of proteins based on sequence

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

13 July 2018

1 reference

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Pfam: a comprehensive database of protein domain families based on seed alignments

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Bridging the protein sequence-structure gap by structure predictions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Basic local alignment search tool

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Database of homology-derived protein structures and the structural meaning of sequence alignment

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

The T-DNA-linked VirD2 protein contains two distinct functional nuclear localization signals

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Inferring sub-cellular localization through automated lexical analysis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168921

Using Perl to facilitate biological analysis

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824321

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Bridging the gap between sequence and function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824321

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKG514

1 reference

7 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

7 August 2017

1 reference