(Q34537161)

2 August 2017

title

Decoupling epigenetic and genetic effects through systematic analysis of gene position (English)

1 reference

2 August 2017

Trey Ideker

1 reference

2 August 2017

Lorraine Pillus

1 reference

2 August 2017

Menzies Chen

1 reference

2 August 2017

Katherine Licon

series ordinal

1 reference

2 August 2017

Rei Otsuka

series ordinal

1 reference

2 August 2017

publication date

3 January 2013

1 reference

2 August 2017

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2 August 2017

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2 August 2017

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2 August 2017

page(s)

128-137

1 reference

Genome-wide protein-DNA binding dynamics suggest a molecular clutch for transcription factor function

2 August 2017

cites work

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7 July 2018

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Genome-wide analysis of chromatin features identifies histone modification sensitive and insensitive yeast transcription factors

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding

7 July 2018

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Noncanonical transcript forms in yeast and their regulation during environmental stress

7 July 2018

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7 July 2018

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Interaction of transcriptional regulators with specific nucleosomes across the Saccharomyces genome

7 July 2018

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Genome-wide views of chromatin structure

7 July 2018

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The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency

7 July 2018

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Distinct transcriptional outputs associated with mono- and dimethylated histone H3 arginine 2.

7 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 July 2018

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Analysis of Myc-induced histone modifications on target chromatin

7 July 2018

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The transcriptional landscape of the yeast genome defined by RNA sequencing

7 July 2018

1 reference

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Genome-wide approaches to studying chromatin modifications

7 July 2018

1 reference

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Systematic screens for human disease genes, from yeast to human and back

7 July 2018

1 reference

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ChromatinDB: a database of genome-wide histone modification patterns for Saccharomyces cerevisiae

7 July 2018

1 reference

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High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method

7 July 2018

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Enabling a community to dissect an organism: overview of the Neurospora functional genomics project

7 July 2018

1 reference

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dSLAM analysis of genome-wide genetic interactions in Saccharomyces cerevisiae

7 July 2018

1 reference

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A chromatin-mediated mechanism for specification of conditional transcription factor targets

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Genome-wide patterns of histone modifications in yeast.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Myc-binding-site recognition in the human genome is determined by chromatin context

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

The epigenetic progenitor origin of human cancer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

7 July 2018

1 reference

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Genome-wide map of nucleosome acetylation and methylation in yeast

7 July 2018

1 reference

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Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast

7 July 2018

1 reference

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The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes

7 July 2018

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Long-range silencing and position effects at telomeres and centromeres: parallels and differences

7 July 2018

1 reference

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Genome-wide insertional mutagenesis of Arabidopsis thaliana

7 July 2018

1 reference

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Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II

7 July 2018

1 reference

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Sequencing and comparison of yeast species to identify genes and regulatory elements

7 July 2018

1 reference

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The different (sur)faces of Rap1p.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Active genes are tri-methylated at K4 of histone H3

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Targeted recruitment of Rpd3 histone deacetylase represses transcription by inhibiting recruitment of Swi/Snf, SAGA, and TATA binding protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Functional profiling of the Saccharomyces cerevisiae genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Systematic screen for human disease genes in yeast

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

A new mathematical model for relative quantification in real-time RT-PCR

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

SET1, a yeast member of the trithorax family, functions in transcriptional silencing and diverse cellular processes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Sequence and promoter analysis of the highly expressed TEF gene of the filamentous fungus Ashbya gossypii

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Position effect at S. cerevisiae telomeres: reversible repression of Pol II transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Position-effect variegation after 60 years

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Foreign gene expression in yeast: a review

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Histone modification: cause or cog?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

An optimised protocol for the extraction of non-viral mRNA from human plasma frozen for three years

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Mapping global histone acetylation patterns to gene expression

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563736

Structural and functional heterogeneity of rap1p complexes with telomeric and UASrpg-like DNA sequences

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23291096

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELREP.2012.12.003

1 reference

2 August 2017

1 reference

2 August 2017

1 reference