(Q34341934)

1 August 2017

title

Genome-wide detection of genes targeted by non-Ig somatic hypermutation in lymphoma (English)

1 reference

1 August 2017

Olivier Elemento

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author name string

Yanwen Jiang

1 reference

1 August 2017

T David Soong

1 reference

1 August 2017

Ling Wang

1 reference

1 August 2017

Ari M Melnick

1 reference

1 August 2017

language of work or name

English

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publication date

12 July 2012

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1 August 2017

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1 August 2017

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1 August 2017

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1 August 2017

page(s)

e40332

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Creative Commons Attribution 4.0 International

1 August 2017

start time

12 July 2012

1 reference

April 2022 Public Data File from Crossref

copyrighted

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cites work

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6 July 2018

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6 July 2018

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Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes

6 July 2018

1 reference

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Activation-induced cytidine deaminase targets DNA at sites of RNA polymerase II stalling by interaction with Spt5

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

AID and somatic hypermutation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

6 July 2018

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Revealing global regulatory perturbations across human cancers

6 July 2018

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Targeted disruption of the S1P2 sphingosine 1-phosphate receptor gene leads to diffuse large B-cell lymphoma formation

6 July 2018

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Alterations in CIITA constitute a common mechanism accounting for downregulation of MHC class II expression in diffuse large B-cell lymphoma (DLBCL).

6 July 2018

1 reference

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6 July 2018

1 reference

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Mechanism and regulation of class switch recombination

6 July 2018

1 reference

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The biochemistry of somatic hypermutation

6 July 2018

1 reference

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Regulation of the plasma cell transcription factor Blimp-1 gene by Bach2 and Bcl6.

6 July 2018

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Cooperative signaling through the signal transducer and activator of transcription 3 and nuclear factor-{kappa}B pathways in subtypes of diffuse large B-cell lymphoma

6 July 2018

1 reference

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Architecture and dynamics of the transcription factor network that regulates B-to-plasma cell differentiation

6 July 2018

1 reference

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High-resolution profiling of histone methylations in the human genome

6 July 2018

1 reference

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A library of gene expression signatures to illuminate normal and pathological lymphoid biology

6 July 2018

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Phosphorylation of serine 147 of tis21/BTG2/pc3 by p-Erk1/2 induces Pin-1 binding in cytoplasm and cell death

6 July 2018

1 reference

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Expression of activation-induced cytidine deaminase in human B-cell non-Hodgkin lymphomas

6 July 2018

1 reference

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Blimp-1 orchestrates plasma cell differentiation by extinguishing the mature B cell gene expression program

6 July 2018

1 reference

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The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma

6 July 2018

1 reference

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Constitutive nuclear factor kappaB activity is required for survival of activated B cell-like diffuse large B cell lymphoma cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

The intrinsic hypermutability of antibody heavy and light chain genes decays exponentially

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Hypermutation of multiple proto-oncogenes in B-cell diffuse large-cell lymphomas

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Gene ontology: tool for the unification of biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Failure of B-cell differentiation in mice lacking the transcription factor EBF.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

The presence of clonogenic cells in high-grade malignant lymphoma: a prognostic factor.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Patterns of somatic mutations in immunoglobulin variable genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Somatic hypermutagenesis in immunoglobulin genes. II. Influence of neighbouring base sequences on mutagenesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation

6 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Somatic mutation hotspots correlate with DNA polymerase eta error spectrum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Inactivating SOCS1 mutations are caused by aberrant somatic hypermutation and restricted to a subset of B-cell lymphoma entities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Expression of the AID protein in normal and neoplastic B cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

AID is expressed in germinal center B-cell-like and activated B-cell-like diffuse large-cell lymphomas and is not correlated with intraclonal heterogeneity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Mutations of the BCL6 proto-oncogene disrupt its negative autoregulation in diffuse large B-cell lymphoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Bach2 represses plasma cell gene regulatory network in B cells to promote antibody class switch

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

CXCR4 expression functionally discriminates centroblasts versus centrocytes within human germinal center B cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Two levels of protection for the B cell genome during somatic hypermutation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040332

Expression of activation-induced cytidine deaminase is confined to B-cell non-Hodgkin's lymphomas of germinal-center phenotype

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3395700

Somatic hypermutation of immunoglobulin genes is linked to transcription initiation

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22808135

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification of TCL1A as an immunohistochemical marker of adverse outcome in diffuse large B-cell lymphomas

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22808135

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0040332

1 reference

1 August 2017

0 references

1 reference

1 August 2017

1 reference