(Q34139922)

31 July 2017

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title

Computational methods for the prediction of protein interactions (English)

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31 July 2017

main subject

computational biology

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31 July 2017

Florencio Pazos

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31 July 2017

publication date

1 June 2002

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Current Opinion in Structural Biology

31 July 2017

published in

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31 July 2017

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31 July 2017

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31 July 2017

page(s)

368-373

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A novel genetic system to detect protein-protein interactions

31 July 2017

cites work

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A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules

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Predicting protein function by genomic context: quantitative evaluation and qualitative inferences

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Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

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Microbial genescapes: phyletic and functional patterns of ORF distribution among prokaryotes

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Conserved clusters of functionally related genes in two bacterial genomes.

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Conservation of gene order: a fingerprint of proteins that physically interact

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Detecting protein function and protein-protein interactions from genome sequences

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Protein interaction maps for complete genomes based on gene fusion events

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Prediction of protein interactions: metabolic enzymes are frequently involved in gene fusion

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The coevolution of gene family trees

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Species-specificity of the cohesin-dockerin interaction betweenClostridium thermocellum andClostridium cellulolyticum: Prediction of specificity determinants of the dockerin domain

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Co-evolution of proteins with their interaction partners

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Improving contact predictions by the combination of correlated mutations and other sources of sequence information

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Effective use of sequence correlation and conservation in fold recognition

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In silico two-hybrid system for the selection of physically interacting protein pairs.

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7 January 2021

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

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BIND--The Biomolecular Interaction Network Database

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Prediction of protein-protein interactions by docking methods.

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Analysis of protein-protein interaction sites using surface patches

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7 January 2021

The atomic structure of protein-protein recognition sites

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7 January 2021

Prediction of protein interaction sites from sequence profile and residue neighbor list

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Prediction of protein--protein interaction sites in heterocomplexes with neural networks.

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7 January 2021

A method to predict functional residues in proteins

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7 January 2021

An evolutionary trace method defines binding surfaces common to protein families

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7 January 2021

Classification of protein families and detection of the determinant residues with an improved self-organizing map

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7 January 2021

Evolution of the Rab family of small GTP-binding proteins

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7 January 2021

A method to predict residues conferring functional differences between related proteins: application to MAP kinase pathways.

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7 January 2021

Distinct structural elements of rab5 define its functional specificity.

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7 January 2021

Effector recognition by the small GTP-binding proteins Ras and Ral

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7 January 2021

Protein interaction maps for model organisms

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7 January 2021

The large-scale organization of metabolic networks

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7 January 2021

Lethality and centrality in protein networks

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7 January 2021

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

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7 January 2021

Interrogating protein interaction networks through structural biology

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7 January 2021

Evolutionary rate in the protein interaction network

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7 January 2021

10.1016/S0959-440X(02)00333-0

Identifiers

DOI

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31 July 2017

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