(Q34168118)

31 July 2017

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title

The evolutionary genomics of pathogen recombination (English)

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31 July 2017

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Philip Awadalla

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31 July 2017

publication date

1 January 2003

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31 July 2017

published in

Nature Reviews Genetics

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31 July 2017

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31 July 2017

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31 July 2017

page(s)

50-60

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Lateral gene transfer and the nature of bacterial innovation

31 July 2017

cites work

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Clonal divergence in Escherichia coli as a result of recombination, not mutation

21 January 2018

1 reference

High recombination rate in natural populations of Plasmodium falciparum

21 January 2018

1 reference

Recombination and the population structures of bacterial pathogens

21 January 2018

1 reference

Recombination in AIDS viruses

21 January 2018

1 reference

Emergence of new forms of human immunodeficiency virus type 1 intersubtype recombinants in central Myanmar

21 January 2018

1 reference

Microsatellite markers reveal a spectrum of population structures in the malaria parasite Plasmodium falciparum

21 January 2018

1 reference

Why sex and recombination?

21 January 2018

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EVOLUTION OF SEXRESOLVING THE PARADOX OF SEX AND RECOMBINATION

21 January 2018

1 reference

Some Genetic Aspects of Sex

21 January 2018

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THE RELATION OF RECOMBINATION TO MUTATIONAL ADVANCE

21 January 2018

1 reference

The molecular epidemiology of human immunodeficiency virus type 1 in Edinburgh

21 January 2018

1 reference

Analysis of HIV-1 env gene sequences reveals evidence for a low effective number in the viral population

21 January 2018

1 reference

Statistical methods for detecting molecular adaptation

21 January 2018

1 reference

Timing the ancestor of the HIV-1 pandemic strains

21 January 2018

1 reference

Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes

21 January 2018

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Genetic drift and within-host metapopulation dynamics of HIV-1 infection

21 January 2018

1 reference

A constant rate of spontaneous mutation in DNA-based microbes

21 January 2018

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Mutation rates among RNA viruses

21 January 2018

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How clonal are human mitochondria?

21 January 2018

1 reference

A novel approach to detecting and measuring recombination: new insights into evolution in viruses, bacteria, and mitochondria

21 January 2018

1 reference

Unveiling the Molecular Clock in the Presence of Recombination

21 January 2018

1 reference

Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

21 January 2018

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Widespread intra-serotype recombination in natural populations of dengue virus

21 January 2018

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Genetic heterogeneity of SAT-1 type foot-and-mouth disease viruses in southern Africa

21 January 2018

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Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences

21 January 2018

1 reference

Comments on the detection of reciprocal recombination or gene conversion.

21 January 2018

1 reference

Molecular archaeology of the Escherichia coli genome

21 January 2018

1 reference

Genes lost and genes found: evolution of bacterial pathogenesis and symbiosis

21 January 2018

1 reference

Evaluation of methods for detecting recombination from DNA sequences: computer simulations

21 January 2018

1 reference

A likelihood method for the detection of selection and recombination using nucleotide sequences

21 January 2018

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Evolutionary trees from DNA sequences: A maximum likelihood approach

21 January 2018

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Evaluation of methods for detecting recombination from DNA sequences: empirical data

21 January 2018

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On the Genealogy of Large Populations

21 January 2018

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Ancestral inference from samples of DNA sequences with recombination.

21 January 2018

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Linkage disequilibrium in humans: models and data

21 January 2018

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Nucleotide sequences provide evidence of genetic exchange among distantly related lineages of Trypanosoma cruzi

21 January 2018

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The relative contributions of recombination and point mutation to the diversification of bacterial clones

21 January 2018

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Did the inheritance of a pathogenicity island modify the virulence of Helicobacter pylori?

21 January 2018

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The evolutionary history of methicillin-resistant Staphylococcus aureus (MRSA)

21 January 2018

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Intercontinental spread of a genetically distinctive complex of clones of Neisseria meningitidis causing epidemic disease

21 January 2018

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Electrophoretic variation in adenylate kinase of Neisseria meningitidis is due to inter- and intraspecies recombination

21 January 2018

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Epidemic spread of subgroup III of Neisseria meningitidis serogroup A to South Africa in 1996.

21 January 2018

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Success and virulence in Toxoplasma as the result of sexual recombination between two distinct ancestries.

21 January 2018

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The maintenance of strain structure in populations of recombining infectious agents.

21 January 2018

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The emergence of drug-resistant malaria

21 January 2018

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Multigenic drug resistance among inbred malaria parasites.

21 January 2018

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A role for RAD51 and homologous recombination in Trypanosoma brucei antigenic variation

21 January 2018

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Spread of chloroquine resistance in Plasmodium falciparum

21 January 2018

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Genetic diversity and chloroquine selective sweeps in Plasmodium falciparum

21 January 2018

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A principal target of human immunity to malaria identified by molecular population genetic and immunological analyses

21 January 2018

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Genetic damage, mutation, and the evolution of sex

21 January 2018

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Origins of the machinery of recombination and sex.

21 January 2018

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Meiotic recombination hot spots and cold spots

21 January 2018

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Sequence of the 1918 pandemic influenza virus nonstructural gene (NS) segment and characterization of recombinant viruses bearing the 1918 NS genes

21 January 2018

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Reassortment in vivo: driving force for diversity of human rotavirus strains isolated in the United Kingdom between 1995 and 1999.

21 January 2018

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The HIV-1 repeated sequence R as a robust hot-spot for copy-choice recombination

21 January 2018

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A genetic map and recombination parameters of the human malaria parasite Plasmodium falciparum

21 January 2018

1 reference

Paternal inheritance of mitochondrial DNA

21 January 2018

1 reference

Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences

21 January 2018

1 reference

RDP: detection of recombination amongst aligned sequences

21 January 2018

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Reconstructing evolution of sequences subject to recombination using parsimony

21 January 2018

1 reference

The effect of evenly spaced constant sites on the distribution of the random division of a molecular sequence

21 January 2018

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Gene conversion in the evolution of the human and chimpanzee MHC class I loci

21 January 2018

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Directional gene movement from human-pathogenic to commensal-like streptococci

21 January 2018

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Molecular characterisation of Plasmodium reichenowi apical membrane antigen-1 (AMA-1), comparison with P. falciparum AMA-1, and antibody-mediated inhibition of red cell invasion.

21 January 2018

1 reference

Conservation and heterogeneity of the glutamate-rich protein (GLURP) among field isolates and laboratory lines of Plasmodium falciparum

21 January 2018

1 reference

Polymorphism in the gene encoding the Pfs48/45 antigen of Plasmodium falciparum. XI. Asembo Bay Cohort Project

21 January 2018

1 reference

Plasmodium vivax synonymous substitution frequencies, evolution and population structure deduced from diversity in AMA 1 and MSP 1 genes

21 January 2018

1 reference

Molecular epidemiology of measles viruses in the United States, 1997-2001.

21 January 2018

1 reference

Genetic characterization of contemporary wild-type measles viruses from Vietnam and the People's Republic of China: identification of two genotypes within clade H.

21 January 2018

1 reference

Immune and artificial selection in the haemagglutinin (H) glycoprotein of measles virus

21 January 2018

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Homologous recombination in GB virus C/hepatitis G virus

21 January 2018

1 reference

Free recombination within Helicobacter pylori

21 January 2018

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Allelic Variation within Helicobacter pylori babA and babB

21 January 2018

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Genetic analysis reveals epidemiologic patterns in the spread of human immunodeficiency virus

21 January 2018

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Genetic clustering of all 102 human rhinovirus prototype strains: serotype 87 is close to human enterovirus 70.

21 January 2018

1 reference

A case-control study on a novel DNA virus (TT virus) infection and hepatocellular carcinoma. The Brescia HCC Study

21 January 2018

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Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination

21 January 2018

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Properties of a neutral allele model with intragenic recombination

31 March 2020

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Detecting recombination from gene trees

31 March 2020

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Recombination and the molecular clock

31 March 2020

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Theoretical foundation of population genetics at the molecular level

31 March 2020

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Estimating the recombination parameter of a finite population model without selection

31 March 2020

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A comparison of estimators of the population recombination rate

31 March 2020

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Sex, strains and virulence

31 March 2020

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The evolution of mutation rates: separating causes from consequences

31 March 2020

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Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning

31 March 2020

1 reference

Molecular characterization of a globally distributed lineage of serotype 12F Streptococcus pneumoniae causing invasive disease

31 March 2020

1 reference

Linkage disequilibrium in the white locus region of Drosophila melanogaster

31 March 2020

1 reference

inferred from DOI database lookup

7 January 2021

based on heuristic

Intergenerational transmission of pathogenic heteroplasmic mitochondrial DNA

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inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NRG964

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Dimensions Publication ID

31 July 2017

1045684541

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