(Q33994781)

30 July 2017

title

RNA polymerases from Bacillus subtilis and Escherichia coli differ in recognition of regulatory signals in vitro (English)

1 reference

30 July 2017

Escherichia coli

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Bacillus subtilis

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I Artsimovitch

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30 July 2017

V Svetlov

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30 July 2017

L Anthony

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30 July 2017

R R Burgess

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30 July 2017

R Landick

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30 July 2017

language of work or name

English

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publication date

1 November 2000

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30 July 2017

published in

Journal of Bacteriology

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30 July 2017

volume

182

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30 July 2017

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30 July 2017

page(s)

6027-6035

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describes a project that uses

30 July 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC94735/fullTextXML

inferred from PubMed Central ID database lookup

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28 July 2018

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28 July 2018

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28 July 2018

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The main early and late promoters of Bacillus subtilis phage phi 29 form unstable open complexes with sigma A-RNA polymerase that are stabilized by DNA supercoiling

28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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Head-on collision between a DNA replication apparatus and RNA polymerase transcription complex

28 July 2018

1 reference

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28 July 2018

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Transcription in archaea: similarity to that in eucarya

28 July 2018

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Termination-altering amino acid substitutions in the beta' subunit of Escherichia coli RNA polymerase identify regions involved in RNA chain elongation

28 July 2018

1 reference

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Solution structure of the activator contact domain of the RNA polymerase alpha subunit

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Compilation and analysis ofEscherichia colipromoter DNA sequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Mutations of the Escherichia coli lacUV5 promoter resulting in increased expression in Bacillus subtilis.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Contributions of RNA secondary structure and length of the thymidine tract to transcription termination at the thr operon attenuator.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

nusA amber mutation that causes temperature-sensitive growth of Escherichia coli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Terminator-distal sequences determine the in vitro efficiency of the early terminators of bacteriophages T3 and T7.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Early transcribed sequences affect termination efficiency of Escherichia coli RNA polymerase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Sequences linked to prokaryotic promoters can affect the efficiency of downstream termination sites

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Amino acid changes in conserved regions of the beta-subunit of Escherichia coli RNA polymerase alter transcription pausing and termination.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Prediction of rho-independent Escherichia coli transcription terminators. A statistical analysis of their RNA stem-loop structures.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Transcription pausing by Escherichia coli RNA polymerase is modulated by downstream DNA sequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Parameters affecting transcription termination by Escherichia coli RNA. II. Construction and analysis of hybrid terminators

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Mechanism of initiation of transcription by Bacillus subtilis RNA polymerase at several promoters

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Folding of a large ribozyme during transcription and the effect of the elongation factor NusA.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Autogenous regulation of transcription termination factor Rho and the requirement for Nus factors in Bacillus subtilis.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Interaction of a nascent RNA structure with RNA polymerase is required for hairpin-dependent transcriptional pausing but not for transcript release

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Regions specifying transcriptional termination and pausing in the bacteriophage SP01 terminal repeat

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Nucleotide sequences that signal the initiation of transcription and translation in Bacillus subtilis

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=94735

Expression, abundance, and RNA polymerase binding properties of the delta factor of Bacillus subtilis

29 October 2018

1 reference

12 December 2020

DNA-binding determinants of the alpha subunit of RNA polymerase: novel DNA-binding domain architecture

1 reference

12 December 2020

Santa Rosalia revisited: why are there so many species of bacteria?

1 reference

12 December 2020

The roles of specific template nucleosides in the formation of stable transcription complexes by Escherichia coli RNA polymerase

1 reference

12 December 2020

Rapid purification of His(6)-tagged Bacillus subtilis core RNA polymerase

1 reference

12 December 2020

Cycling of ribonucleic acid polymerase to produce oligonucleotides during initiation in vitro at the lac UV5 promoter

1 reference

12 December 2020

Promoter selectivity of Escherichia coli RNA polymerase. II: Altered promoter selection by mutant holoenzymes

1 reference

12 December 2020

Amplification and isolation of E. coli nusA protein and studies of its effects on in vitro RNA chain elongation

1 reference

12 December 2020

Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase

1 reference

12 December 2020

Effect of the delta subunit of Bacillus subtilis RNA polymerase on initiation of RNA synthesis at two bacteriophage phi 29 promoters

1 reference

12 December 2020

Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rate

1 reference

12 December 2020

10.1128/JB.182.21.6027-6035.2000

Identifiers

DOI

1 reference

30 July 2017

1 reference

30 July 2017

1 reference