(Q33893293)

29 July 2017

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title

PeakRanger: a cloud-enabled peak caller for ChIP-seq data (English)

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29 July 2017

Lincoln Stein

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29 July 2017

Xin Feng

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29 July 2017

Robert Grossman

series ordinal

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29 July 2017

publication date

9 May 2011

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29 July 2017

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29 July 2017

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29 July 2017

page(s)

139

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Creative Commons Attribution 2.0 Generic

29 July 2017

start time

9 May 2011

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April 2022 Public Data File from Crossref

copyrighted

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April 2022 Public Data File from Crossref

cites work

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5 July 2018

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5 July 2018

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Evaluation of algorithm performance in ChIP-seq peak detection

5 July 2018

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HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls

5 July 2018

1 reference

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Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks

5 July 2018

1 reference

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Design and analysis of ChIP-seq experiments for DNA-binding proteins

5 July 2018

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An integrated software system for analyzing ChIP-chip and ChIP-seq data

5 July 2018

1 reference

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5 July 2018

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5 July 2018

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5 July 2018

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FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology

5 July 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

5 July 2018

1 reference

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

5 July 2018

1 reference

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Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

5 July 2018

1 reference

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Genome-wide mapping of in vivo protein-DNA interactions

5 July 2018

1 reference

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High-resolution profiling of histone methylations in the human genome

5 July 2018

1 reference

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Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF

5 July 2018

1 reference

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Genome-wide location and function of DNA binding proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103446

Combining evidence using p-values: application to sequence homology searches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3103446

5 July 2018

Identifiers

DOI

10.1186/1471-2105-12-139

1 reference

29 July 2017

DBLP publication ID

journals/bmcbi/FengGS11

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference