(Q33605544)

28 July 2017

title

rQuant.web: a tool for RNA-Seq-based transcript quantitation (English)

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28 July 2017

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Gunnar Rätsch

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Regina Bohnert

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28 July 2017

language of work or name

English

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publication date

15 June 2010

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28 July 2017

published in

Nucleic Acids Research

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28 July 2017

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28 July 2017

issue

Web Server issue

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28 July 2017

page(s)

W348-51

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Creative Commons Attribution-NonCommercial 2.5 Generic

28 July 2017

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyrighted

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cites work

Biases in Illumina transcriptome sequencing caused by random hexamer priming

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Galaxy: a web-based genome analysis tool for experimentalists

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

RNA-Seq gene expression estimation with read mapping uncertainty

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Computation for ChIP-seq and RNA-seq studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Simultaneous alignment of short reads against multiple genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

mGene: accurate SVM-based gene finding with an application to nematode genomes

21 June 2018

1 reference

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The Sequence Alignment/Map format and SAMtools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

mGene.web: a web service for accurate computational gene finding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Statistical inferences for isoform expression in RNA-Seq

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Massively parallel sequencing of the polyadenylated transcriptome of C. elegans

21 June 2018

1 reference

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RNA-Seq: a revolutionary tool for transcriptomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Optimal spliced alignments of short sequence reads

21 June 2018

1 reference

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Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

21 June 2018

1 reference

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

Galaxy: a platform for interactive large-scale genome analysis

21 June 2018

1 reference

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Limitations and possibilities of small RNA digital gene expression profiling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896134

30 October 2018

Identifiers

DOI

10.1093/NAR/GKQ448

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28 July 2017

DBLP publication ID

journals/nar/BohnertR10

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DBLP Dataset 2021-01-02

28 January 2021

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28 July 2017

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