(Q33605065)

English

Toward the dynamic interactome: it's about time

scientific article

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

1 reference

Europe PubMed Central

Toward the dynamic interactome: it's about time (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

object named as

Donna K Slonim

3

0 references

Teresa M. Przytycka

object named as

Teresa M Przytycka

1

0 references

author name string

Mona Singh

2

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

publication date

8 January 2010

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Briefings in Bioinformatics

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

11

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

15-29

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

The crosstalk between EGF, IGF, and Insulin cell signaling pathways--computational and experimental analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Computational approaches to the integration of gene expression, ChIP-chip and sequence data in the inference of gene regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A dynamic network of transcription in LPS-treated human subjects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Recovering time-varying networks of dependencies in social and biological studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

BowTieBuilder: modeling signal transduction pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Information flow analysis of interactome networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Dynamic and complex transcription factor binding during an inducible response in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Graph theoretical approach to study eQTL: a case study of Plasmodium falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Predicting functionality of protein-DNA interactions by integrating diverse evidence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

KELLER: estimating time-varying interactions between genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Detecting gene-gene interactions that underlie human diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Fault tolerance in protein interaction networks: stable bipartite subgraphs and redundant pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Methods for the inference of biological pathways and networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Fuzzy logic analysis of kinase pathway crosstalk in TNF/EGF/insulin-induced signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Using network component analysis to dissect regulatory networks mediated by transcription factors in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Integrating siRNA and protein-protein interaction data to identify an expanded insulin signaling network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Modularity and interactions in the genetics of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Timing of gene expression responses to environmental changes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Learning a prior on regulatory potential from eQTL data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A complex-based reconstruction of the Saccharomyces cerevisiae interactome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Dynamic map of protein interactions in the Escherichia coli chemotaxis pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Boolean network simulations for life scientists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Activity motifs reveal principles of timing in transcriptional control of the yeast metabolic network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Organization of physical interactomes as uncovered by network schemas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Network model of survival signaling in large granular lymphocyte leukemia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

NetGrep: fast network schema searches in interactomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Global alignment of multiple protein interaction networks with application to functional orthology detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

High-quality binary protein interaction map of the yeast interactome network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Mapping multiprotein complexes by affinity purification and mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Design logic of a cannabinoid receptor signaling network that triggers neurite outgrowth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

An in vivo map of the yeast protein interactome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

The signaling petri net-based simulator: a non-parametric strategy for characterizing the dynamics of cell-specific signaling networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Functional maps of protein complexes from quantitative genetic interaction data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Mapping genetically compensatory pathways from synthetic lethal interactions in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

eQED: an efficient method for interpreting eQTL associations using protein networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Identifying trait clusters by linkage profiles: application in genetical genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Dissecting the logical types of network control in gene expression profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Gene network inference via structural equation modeling in genetical genomics experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Using protein complexes to predict phenotypic effects of gene mutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Empirical multiscale networks of cellular regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Temporal ChIP-on-chip reveals Biniou as a universal regulator of the visceral muscle transcriptional network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

High-throughput genetic interaction mapping in the fission yeast Schizosaccharomyces pombe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Fluorescent protein FRET: the good, the bad and the ugly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Integrating molecular and network biology to decode endocytosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Integrating physical and genetic maps: from genomes to interaction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Detection of eQTL modules mediated by activity levels of transcription factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Still stratus not altocumulus: further evidence against the date/party hub distinction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Modeling systems-level regulation of host immune responses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genome-wide mapping of in vivo protein-DNA interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Network motifs: theory and experimental approaches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Supercoil-driven DNA structures regulate genetic transactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Getting connected: analysis and principles of biological networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Revealing static and dynamic modular architecture of the eukaryotic protein interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Pathway redundancy and protein essentiality revealed in the Saccharomyces cerevisiae interaction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Identification of functional modules using network topology and high-throughput data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Reverse engineering cellular networks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Faithful modeling of transient expression and its application to elucidating negative feedback regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Reconstructing dynamic regulatory maps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Biclustering algorithms for biological data analysis: a survey

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genomic analysis of the hierarchical structure of regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Stratus not altocumulus: a new view of the yeast protein interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Graemlin: general and robust alignment of multiple large interaction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Tracking and elucidating alphavirus-host protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Graph-based methods for analysing networks in cell biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Evolutionary and physiological importance of hub proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Why do hubs tend to be essential in protein networks?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genome-wide analysis of protein-DNA interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Decomposition of overlapping protein complexes: a graph theoretical method for analyzing static and dynamic protein associations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Causal inference of regulator-target pairs by gene mapping of expression phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Modeling cellular machinery through biological network comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Proteome survey reveals modularity of the yeast cell machinery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genome-wide associations of gene expression variation in humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Global analysis of protein phosphorylation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Mapping determinants of human gene expression by regional and genome-wide association

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Exploiting naturally occurring DNA variation and molecular profiling data to dissect disease and drug response traits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Differential coexpression analysis using microarray data and its application to human cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Towards a proteome-scale map of the human protein–protein interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Formation of regulatory patterns during signal propagation in a Mammalian cellular network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genetic interactions between polymorphisms that affect gene expression in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Validation and refinement of gene-regulatory pathways on a network of physical interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

An integrative genomics approach to infer causal associations between gene expression and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Topological units of environmental signal processing in the transcriptional regulatory network of Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Systematic interpretation of genetic interactions using protein networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Causal protein-signaling networks derived from multiparameter single-cell data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Differential network expression during drug and stress response.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Gene-environment interactions in human diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genetical genomics analysis of a yeast segregant population for transcription network inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Dynamic Complex Formation During the Yeast Cell Cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Conserved patterns of protein interaction in multiple species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

The landscape of genetic complexity across 5,700 gene expression traits in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genetic inheritance of gene expression in human cell lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genomic analysis of regulatory network dynamics reveals large topological changes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Transcriptional regulatory code of a eukaryotic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Bow ties, metabolism and disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Evidence for dynamically organized modularity in the yeast protein-protein interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Coexpression analysis of human genes across many microarray data sets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genomic analysis of essentiality within protein networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Superfamilies of evolved and designed networks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Qualitative simulation of genetic regulatory networks using piecewise-linear models.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Inferring cellular networks using probabilistic graphical models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A map of the interactome network of the metazoan C. elegans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Network component analysis: reconstruction of regulatory signals in biological systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A protein interaction map of Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Inferring gene networks from time series microarray data using dynamic Bayesian networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Conserved pathways within bacteria and yeast as revealed by global protein network alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A gene-coexpression network for global discovery of conserved genetic modules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Statistical significance for genomewide studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Automated modelling of signal transduction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Transcriptional regulatory networks in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Discovering regulatory and signalling circuits in molecular interaction networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Network motifs in the transcriptional regulation network of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genetic analysis of the mouse brain proteome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Modeling and simulation of genetic regulatory systems: a literature review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Systematic genetic analysis with ordered arrays of yeast deletion mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Network dynamics and cell physiology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Lethality and centrality in protein networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A comprehensive two-hybrid analysis to explore the yeast protein interactome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Using graphical models and genomic expression data to statistically validate models of genetic regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

The protein-protein interaction map of Helicobacter pylori

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Using Bayesian networks to analyze expression data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Genetic network inference: from co-expression clustering to reverse engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Biclustering of expression data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

KEGG: kyoto encyclopedia of genes and genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

A novel genetic system to detect protein-protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

21 June 2018

Efficient algorithms for detecting signaling pathways in protein interaction networks

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Pairwise alignment of protein interaction networks.

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-network

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Physical network models.

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Inferring subnetworks from perturbed expression profiles

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Modelling regulatory pathways in E. coli from time series expression profiles

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Finding disease specific alterations in the co-expression of genes

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

The homeodomain protein PAL-1 specifies a lineage-specific regulatory network in the C. elegans embryo.

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Understanding modularity in molecular networks requires dynamics

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Genetical genomics: the added value from segregation.

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

An integrative approach for causal gene identification and gene regulatory pathway inference

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

An integrative genomics approach to the reconstruction of gene networks in segregating populations.

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

The functional response of upstream DNA to dynamic supercoiling in vivo

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Subspace differential coexpression analysis: problem definition and a general approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2810115

30 October 2018

Integrative genetic analysis of transcription modules: towards filling the gap between genetic loci and inherited traits

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Inferring gene transcriptional modulatory relations: a genetical genomics approach

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP057

21 January 2018

Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/20061351

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks

1 reference

https://pubmed.ncbi.nlm.nih.gov/20061351

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcript stability in the protein interaction network of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/20061351

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/BIB/BBP057

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

DBLP publication ID

journals/bib/PrzytyckaSS10

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33605065&oldid=1973430071"