(Q33599547)

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Genomics of sponge-associated Streptomyces spp. closely related to Streptomyces albus J1074: insights into marine adaptation and secondary metabolite biosynthesis potential

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

Genomics of sponge-associated Streptomyces spp. closely related to Streptomyces albus J1074: insights into marine adaptation and secondary metabolite biosynthesis potential (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

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secondary metabolite

1 reference

based on heuristic

inferred from title

Streptomyces albus

object named as

Streptomyces albus

1 reference

based on heuristic

inferred from title

object named as

Dmitry B Malko

2

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Sergey B. Zotchev

object named as

Sergey B Zotchev

10

0 references

Christian Rückert

object named as

Christian Rückert

5

0 references

Mikhail Gelfand

object named as

Mikhail S Gelfand

9

0 references

Jörn Kalinowski

8

object named as

Jörn Kalinowski

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

author name string

Elena Ian

1

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Olga N Sekurova

3

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Harald Bredholt

4

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Marina E Borisova

6

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Andreas Albersmeier

7

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Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

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publication date

12 May 2014

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

e96719

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

copyright license

Creative Commons Attribution 4.0 International

12 May 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Activation and identification of five clusters for secondary metabolites in Streptomyces albus J1074.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Insights into naturally minimised Streptomyces albus J1074 genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

The genome sequence of Streptomyces lividans 66 reveals a novel tRNA-dependent peptide biosynthetic system within a metal-related genomic island.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer

1 reference

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28 July 2018

Genetic complementation of the obligate marine actinobacterium Salinispora tropica with the large mechanosensitive channel gene mscL rescues cells from osmotic downshock

1 reference

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28 July 2018

The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Comparative genomics reveals evidence of marine adaptation in Salinispora species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Evolutionary insight from whole-genome sequencing of experimentally evolved microbes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Evolution of secondary metabolite genes in three closely related marine actinomycete species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Giant linear plasmids in Streptomyces: a treasure trove of antibiotic biosynthetic clusters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

The sequence of a 1.8-mb bacterial linear plasmid reveals a rich evolutionary reservoir of secondary metabolic pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Comprehensive investigation of marine Actinobacteria associated with the sponge Halichondria panicea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Effects of subinhibitory concentrations of antibiotics on SOS and DNA repair gene expression in Staphylococcus aureus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

NCBI BLAST: a better web interface

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Viewing and editing assembled sequences using Consed

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Rare actinomycete bacteria from the shallow water sediments of the Trondheim fjord, Norway: isolation, diversity and biological activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Antibiotics as signalling molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Intraspecific variability of the terminal inverted repeats of the linear chromosome of Streptomyces ambofaciens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Mauve: multiple alignment of conserved genomic sequence with rearrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Functional angucycline-like antibiotic gene cluster in the terminal inverted repeats of the Streptomyces ambofaciens linear chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Improved microbial gene identification with GLIMMER

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Consed: A Graphical Tool for Sequence Finishing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

NAD+ binding to the Escherichia coli K(+)-uptake protein TrkA and sequence similarity between TrkA and domains of a family of dehydrogenases suggest a role for NAD+ in bacterial transport

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Ecology of actinomycetes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

The SalI (SalGI) restriction-modification system of Streptomyces albus G.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Enterocin, a new antibiotic taxonomy, isolation and characterization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018334

28 July 2018

Marine actinobacteria: new opportunities for natural product search and discovery.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Sponge-derived Streptomyces producing isoprenoids via the mevalonate pathway

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Streptomyces associated with a marine sponge Haliclona sp.; biosynthetic genes for secondary metabolites and products

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Draft genome sequence of marine-derived Streptomyces sp. strain AA0539, isolated from the Yellow Sea, China

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Characterization of Streptomyces spp. isolated from the sea surface microlayer in the Trondheim Fjord, Norway.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Cloning and sequencing of a K+ transport gene (trk A) from the marine bacterium Vibrio alginolyticus

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Cloning, sequencing and analysis of the enterocin biosynthesis gene cluster from the marine isolate 'Streptomyces maritimus': evidence for the derailment of an aromatic polyketide synthase.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0096719

21 January 2018

Identifiers

10.1371/JOURNAL.PONE.0096719

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

2014PLoSO...996719I

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release_3fxtihrin5cwfp2vpnacu6mnvi

1 reference

https://api.fatcat.wiki/v0/release/3fxtihrin5cwfp2vpnacu6mnvi

24 November 2022

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PMC publication ID

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Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

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28 July 2017

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