(Q33402631)

26 July 2017

title

Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway (English)

1 reference

Putative signal peptidase complex subunit

26 July 2017

0 references

0 references

1 reference

Secreted endo-1,4-xylanase

5 February 2019

1 reference

Putative vacuolar protein sorting protein

5 February 2019

1 reference

D-xylose reductase (xylitol dehydrogenase)

5 February 2019

1 reference

Protein with a predicted role in COPII vesicle fusion

5 February 2019

1 reference

Protein disulfide isomerase

5 February 2019

1 reference

5 February 2019

COPII complexn subunit

1 reference

Putative peptidyl-prolyl isomerase

5 February 2019

1 reference

bZIP transcription factor

5 February 2019

1 reference

Putative calnexin, integral membrane ER chaperone

5 February 2019

1 reference

5 February 2019

1 reference

5 February 2019

Secreted beta-D-xylosidase involved in degradation of xylan

1 reference

Putative SEC61 complex subunit

5 February 2019

1 reference

5 February 2019

mRNP complex component

1 reference

Putative ubiquitin-protein ligase

5 February 2019

1 reference

Putative SEC63 complex subunit

5 February 2019

1 reference

ER nucleotide exchange factor

5 February 2019

1 reference

Putative SEC63 complex subunit

5 February 2019

1 reference

5 February 2019

COPII complex subunit

1 reference

Protein with a predicted role in retention of ER membrane proteins

5 February 2019

1 reference

UDP N-acetylglucosamine:dolichol phosphate N-acetyl-glucosaminephosphotransferase, involved in the assembly of dolichol-linked oligosaccharides for N-linked protein glycosylation

5 February 2019

1 reference

Putative exocyst complex subunit

5 February 2019

1 reference

Putative vesicular integral-membrane protein

5 February 2019

1 reference

Putative vacuolar protein sorting protein

5 February 2019

1 reference

COPI complex, beta' subunit

5 February 2019

1 reference

Putative thioredoxin domain protein

5 February 2019

1 reference

protein of unknown function

5 February 2019

1 reference

Putative vacuolar alpha-mannosidase

5 February 2019

1 reference

glucose-6-phosphate dehydrogenase

5 February 2019

1 reference

Putative glucosyltransferase

5 February 2019

1 reference

Oligosaccharyltransferase complex alpha subunit

5 February 2019

1 reference

Protein disulfide isomerase

5 February 2019

1 reference

Oligosaccharyltransferase complex, gamma subunit

5 February 2019

1 reference

5 February 2019

1 reference

5 February 2019

Protein with a predicted role in ER SRP-dependent and -independent protein targeting

1 reference

Putative dolichyl-phosphate glucosyltransferase

5 February 2019

1 reference

Protein with a predicted role in COPII vesicle fusion

5 February 2019

1 reference

1,4-alpha-D-glucan glucohydrolase

5 February 2019

1 reference

Putative exocyst complex subunit

5 February 2019

1 reference

5 February 2019

COPII complex subunit

1 reference

Putative DnaJ co-chaperone

5 February 2019

1 reference

5 February 2019

COPII vesicle component

1 reference

Putative zinc metalloprotease similar to S. cerevisiae STE24

5 February 2019

1 reference

Putative centromere protein

5 February 2019

1 reference

Putative clathrin heavy chain

5 February 2019

1 reference

Putative mannose-phosphate-dolichol utilization protein

5 February 2019

1 reference

Protein with a predicted role in retention of ER membrane proteins

5 February 2019

1 reference

Geranylgeranyltransferase alpha subunit

5 February 2019

1 reference

Extracellular alpha-glucosidase pro-protein

5 February 2019

1 reference

Class I alpha-mannosidase

6 February 2019

1 reference

Putative TRAPP complex subunit

6 February 2019

1 reference

COPII vesicle membrane component

6 February 2019

1 reference

Conserved endosomal membrane protein

6 February 2019

1 reference

Putative class I alpha-mannosidase

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

Putative guanine nucleotide exchange factor

1 reference

6 February 2019

Putative xylulokinase

1 reference

6 February 2019

Putative transaldolase

1 reference

6 February 2019

Putative transaldolase

1 reference

Oligosaccharyltransferase complex beta subunit

6 February 2019

1 reference

Putative alpha-1,6-mannosyltransferase

6 February 2019

1 reference

Putative signal recognition particle subunit

6 February 2019

1 reference

COPI complex, gamma subunit

6 February 2019

1 reference

ER retention HDEL-receptor

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

Putative microtubule binding protein HOOK3

1 reference

Putative Golgi-matrix protein

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

COPI complex, beta subunit

1 reference

COPII vesicle membrane component

6 February 2019

1 reference

Putative ADP-ribosylation factor

6 February 2019

1 reference

Putative glycoprotein cargo receptor

6 February 2019

1 reference

Putative guanosine diphosphatase

6 February 2019

1 reference

COPI complex, epsilon subunit

6 February 2019

1 reference

6 February 2019

Putative transketolase

1 reference

SNARE complex assembly protein

6 February 2019

1 reference

Putative mannosyltransferase

6 February 2019

1 reference

6 February 2019

Putative FAD synthase

1 reference

6 February 2019

COPII complex subunit

1 reference

Putative secreted alpha-galactosidase

6 February 2019

1 reference

Secreted alpha-xylosidase

6 February 2019

1 reference

Putative signal peptidase complex subunit

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

Putative ubiquitin conjugating enzyme

1 reference

Putative ARF GTPase activating protein effector

6 February 2019

1 reference

Putative acid alpha-amylase

6 February 2019

1 reference

DnaK-type molecular chaperone

6 February 2019

1 reference

6 February 2019

1 reference

Putative ER glucosyl hydrolase

6 February 2019

1 reference

Extracellular exo-inulinase

6 February 2019

1 reference

Putative glucosidase II, beta subunit

6 February 2019

1 reference

Putative dolichyl-phosphate mannosyltransferase

6 February 2019

1 reference

Putative secreted endoglucanase A

6 February 2019

1 reference

Putative vacuolar protein sorting protein

6 February 2019

1 reference

Secreted alpha-glucuronidase

6 February 2019

1 reference

Putative mannosyltransferase

6 February 2019

1 reference

Putative ER associated protein degradation protein

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

Putative alpha-1,3-mannosyltransferase

1 reference

Putative signal sequence receptor alpha

6 February 2019

1 reference

COPI complex. alpha subunit

6 February 2019

1 reference

6 February 2019

1 reference

6 February 2019

Putative vacuolar protein sorting AAA-ATPase

1 reference

Putative phosphatidylinositol/-choline transfer protein

6 February 2019

1 reference

ER dolichyl-phosphate beta-d-mannosyltransferase

6 February 2019

1 reference

Putative glucose-6-phosphate isomerase

6 February 2019

1 reference

Putative signal peptidase complex subunit

6 February 2019

1 reference

6 February 2019

Putative thiol oxidase

1 reference

Putative ubiquitin-protein ligase

6 February 2019

1 reference

Putative O-mannosyltransferase

6 February 2019

1 reference

Oligosaccharyltransferase complex subunit

6 February 2019

1 reference

Putative SEC63 complex subunit

6 February 2019

1 reference

Protein disulfide isomerase

6 February 2019

1 reference

Putative guanine nucleotide exchange factor

6 February 2019

1 reference

Putative oligosaccharyltransferase complex, epsilon subunit

6 February 2019

1 reference

UDP-galactose transporter

6 February 2019

1 reference

6 February 2019

Putative DNA-J protein

1 reference

6 February 2019

Thomas R Jørgensen

1 reference

26 July 2017

Theo Goosen

1 reference

26 July 2017

Cees A M J J van den Hondel

1 reference

26 July 2017

Arthur F J Ram

1 reference

26 July 2017

Jens J L Iversen

1 reference

26 July 2017

language of work or name

English

0 references

publication date

23 January 2009

1 reference

26 July 2017

1 reference

26 July 2017

1 reference

26 July 2017

1 reference

Aspergillus niger genome-wide analysis reveals a large number of novel alpha-glucan acting enzymes with unexpected expression profiles

26 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Dissecting cellular components of the secretory pathway in filamentous fungi: insights into their application for protein production

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Genomic analysis of the secretion stress response in the enzyme-producing cell factory Aspergillus niger

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

A novel checkpoint mechanism regulating the G1/S transition

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Mechanisms of COPII vesicle formation and protein sorting.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

The cellular protein P58IPK regulates influenza virus mRNA translation and replication through a PKR-mediated mechanism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Aflatoxigenicity in Aspergillus: molecular genetics, phylogenetic relationships and evolutionary implications

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Signaling functions of phosphatidic acid.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Common features and interesting differences in transcriptional responses to secretion stress in the fungi Trichoderma reesei and Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Global role of the protein kinase Gcn2 in the human pathogen Candida albicans.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

The p100 EBNA-2 coactivator: a highly conserved protein found in a range of exocrine and endocrine cells and tissues in cattle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Role of the unfolded protein response pathway in secretory stress and regulation of INO1 expression in Saccharomyces cerevisiae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

XBP1, downstream of Blimp-1, expands the secretory apparatus and other organelles, and increases protein synthesis in plasma cell differentiation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Gcn4p and novel upstream activating sequences regulate targets of the unfolded protein response

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Roles of N-linked glycans in the endoplasmic reticulum

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Activation of an unfolded protein response during differentiation of antibody-secreting B cells.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

On the safety of Aspergillus niger--a review.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Aspergillus enzymes involved in degradation of plant cell wall polysaccharides

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

The secretion pathway in filamentous fungi: a biotechnological view

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Functional and genomic analyses reveal an essential coordination between the unfolded protein response and ER-associated degradation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Expression profiling of pancreatic beta cells: glucose regulation of secretory and metabolic pathway genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Characterization of a foldase, protein disulfide isomerase A, in the protein secretory pathway of Aspergillus niger

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

The protein disulphide isomerase gene of the fungus Trichoderma reesei is induced by endoplasmic reticulum stress and regulated by the carbon source

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Batch- and continuous-culture transients for two substrate systems

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Identification and toxigenic potential of the industrially important fungi, Aspergillus oryzae and Aspergillus sojae

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Fumonisin B2 production by Aspergillus niger.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Database mining and transcriptional analysis of genes encoding inulin-modifying enzymes of Aspergillus niger

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Versatility of the endoplasmic reticulum protein folding factory

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Homogeneous batch cultures of Aspergillus oryzae by elimination of wall growth in the Variomixing bioreactor

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Toxigenic fungi: which are important?

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Nuclear coactivator protein p100 is present in endoplasmic reticulum and lipid droplets of milk secreting cells

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2639373

Analysis of the role of the gene bipA, encoding the major endoplasmic reticulum chaperone protein in the secretion of homologous and heterologous proteins in black Aspergilli

31 October 2018

1 reference

12 December 2020

Recent advances in the large-scale production of antibody fragments using lower eukaryotic microorganisms

1 reference

12 December 2020

Yeast unfolded protein response pathway regulates expression of genes for anti-oxidative stress and for cell surface proteins

1 reference

12 December 2020

Glucose uptake and growth of glucose-limited chemostat cultures of Aspergillus niger and a disruptant lacking MstA, a high-affinity glucose transporter

1 reference

12 December 2020

Glucoamylase overexpression and secretion in Aspergillus niger: analysis of glycosylation

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-10-44

1 reference

Dimensions Publication ID

26 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-44

9 September 2019

1 reference

26 July 2017

1 reference