(Q33322890)

25 July 2017

title

Memory in microbes: quantifying history-dependent behavior in a bacterium (English)

1 reference

25 July 2017

Adam P Arkin

0 references

Jay Keasling

1 reference

25 July 2017

Denise M Wolf

1 reference

25 July 2017

Lisa Fontaine-Bodin

series ordinal

1 reference

25 July 2017

Ilka Bischofs

series ordinal

1 reference

25 July 2017

Gavin Price

series ordinal

1 reference

25 July 2017

language of work or name

English

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publication date

27 February 2008

1 reference

25 July 2017

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25 July 2017

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25 July 2017

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25 July 2017

page(s)

e1700

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Creative Commons CC0 License

25 July 2017

start time

27 February 2008

1 reference

April 2022 Public Data File from Crossref

copyrighted, dedicated to the public domain by copyright holder

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cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

Bistability in bacteria

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An excitable gene regulatory circuit induces transient cellular differentiation

21 June 2018

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Bifurcation and singularity analysis of a molecular network for the induction of long-term memory

21 June 2018

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Enhancement of cellular memory by reducing stochastic transitions

21 June 2018

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Diversity in times of adversity: probabilistic strategies in microbial survival games

21 June 2018

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A master regulator for biofilm formation by Bacillus subtilis

21 June 2018

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The Bacillus subtilis sin operon: an evolvable network motif

21 June 2018

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Phenotypic consequences of 1,000 generations of selection at elevated CO2 in a green alga

21 June 2018

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Switches, cross-talk and memory in Escherichia coli adherence.

21 June 2018

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Stochastic gene expression in fluctuating environments

21 June 2018

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Bacillus subtilis transcriptional regulators interaction

21 June 2018

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How much information is associated with a particular stimulus?

21 June 2018

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On the deduction of chemical reaction pathways from measurements of time series of concentrations

21 June 2018

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Motifs, modules and games in bacteria

21 June 2018

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Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts

21 June 2018

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Memory in bacteria and phage

21 June 2018

1 reference

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Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability

21 June 2018

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Survival of enteric bacteria in seawater

21 June 2018

1 reference

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Network dynamics and cell physiology

21 June 2018

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Playing Dr Jekyll and Mr Hyde: combined mechanisms of phase variation in bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Bistability in the JNK cascade

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Autoamplification of a two-component regulatory system results in "learning" behavior

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

How to measure the information gained from one symbol

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Construction of a genetic toggle switch in Escherichia coli

21 June 2018

1 reference

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Information theory and neural coding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells

21 June 2018

1 reference

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Mathematical model of the fission yeast cell cycle with checkpoint controls at the G1/S, G2/M and metaphase/anaphase transitions

21 June 2018

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Molecular genetics of sporulation in Bacillus subtilis.

21 June 2018

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Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis

21 June 2018

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Genetics of subtilin and nisin biosyntheses: biosynthesis of lantibiotics

21 June 2018

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FACS-optimized mutants of the green fluorescent protein (GFP)

21 June 2018

1 reference

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SpoIIE governs the phosphorylation state of a protein regulating transcription factor sigma F during sporulation in Bacillus subtilis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Chemotaxis in Bacillus subtilis: how bacteria monitor environmental signals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

A strategy of win-stay, lose-shift that outperforms tit-for-tat in the Prisoner's Dilemma game

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

The DegS/DegU and ComP/ComA two-component systems are part of a network controlling degradative enzyme synthesis and competence in Bacillus subtilis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Regulation of peptide antibiotic production in Bacillus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

The evolution of cooperation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Replacement of the Bacillus subtilis subtilisin structural gene with an In vitro-derived deletion mutation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Extinction dynamics of age-structured populations in a fluctuating environment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Short-term and long-term memory in single cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

A response regulator model in a simple sensory system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Growth history influences starvation-induced expression of uspA, grpE, and rpoS and subsequent cryotolerance in Escherichia coli O157:H7.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Signalling network with a bistable hysteretic switch controls developmental activation of the sigma transcription factor in Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Phenotypic diversity, population growth, and information in fluctuating environments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Tit for tat in heterogeneous populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Phosphatases modulate the bistable sporulation gene expression pattern in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

A multistep epigenetic switch enables the stable inheritance of DNA methylation states.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

A Mathematical Theory of Communication

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Analyzing neural responses to natural signals: maximally informative dimensions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Fighting change with change: adaptive variation in an uncertain world

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

Externally controlled attractor selection in a high-dimensional system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

A microbial modified prisoner's dilemma game: how frequency-dependent selection can lead to random phase variation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Stable isotope ratios as a tool in microbial forensics--Part 2. Isotopic variation among different growth media as a tool for sourcing origins of bacterial cells or spores.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Stable isotope ratios as a tool in microbial forensics--Part 1. Microbial isotopic composition as a function of growth medium.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2264733

Silhouettes: A graphical aid to the interpretation and validation of cluster analysis

31 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

An investigation into the compartmentalization of the sporulation transcription factor sigmaE in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001700

When the going gets tough: survival strategies and environmental signaling networks in Bacillus subtilis

21 January 2018

1 reference

12 December 2020

Control of development by altered localization of a transcription factor in B. subtilis

1 reference

12 December 2020

Bacterial observations: a rudimentary form of intelligence?

1 reference

12 December 2020

Construction of protein overproducer strains in Bacillus subtilis by an integrative approach

1 reference

12 December 2020

The effect of the growth environment on the lag phase of Listeria monocytogenes

1 reference

12 December 2020

Information transport in spatiotemporal systems

1 reference

12 December 2020

Multiple attractors in immunology: theory and experiment

1 reference

12 December 2020

DNA transport during transformation

1 reference

12 December 2020

Cell fates as high-dimensional attractor states of a complex gene regulatory network

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0001700

Identifiers

DOI

1 reference

25 July 2017

0 references

1 reference

25 July 2017

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