(Q33310469)

25 July 2017

title

Genome organization and gene expression shape the transposable element distribution in the Drosophila melanogaster euchromatin (English)

1 reference

25 July 2017

main subject

Drosophila melanogaster

0 references

0 references

Max Reuter

0 references

Pierre Fontanillas

1 reference

25 July 2017

Daniel L Hartl

series ordinal

1 reference

25 July 2017

publication date

10 October 2007

1 reference

25 July 2017

1 reference

25 July 2017

1 reference

25 July 2017

1 reference

25 July 2017

page(s)

e210

1 reference

Creative Commons Attribution 4.0 International

25 July 2017

start time

30 November 2007

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

cites work

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Remarkable site specificity of local transposition into the Hsp70 promoter of Drosophila melanogaster

21 June 2018

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21 June 2018

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Evolutionary fate of retroposed gene copies in the human genome

21 June 2018

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Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome

21 June 2018

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21 June 2018

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21 June 2018

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Combined evidence annotation of transposable elements in genome sequences

21 June 2018

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What transposable elements tell us about genome organization and evolution: the case of Drosophila

21 June 2018

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Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content

21 June 2018

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21 June 2018

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Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations

21 June 2018

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Modelling the correlation between the activities of adjacent genes in Drosophila

21 June 2018

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Insertion/deletion and nucleotide polymorphism data reveal constraints in Drosophila melanogaster introns and intergenic regions

21 June 2018

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cis-Acting determinants of heterochromatin formation on Drosophila melanogaster chromosome four

21 June 2018

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The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes

21 June 2018

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A survey of ovary-, testis-, and soma-biased gene expression in Drosophila melanogaster adults

21 June 2018

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Silencing of a gene adjacent to the breakpoint of a widespread Drosophila inversion by a transposon-induced antisense RNA.

21 June 2018

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Coexpression of neighboring genes in the genome of Arabidopsis thaliana

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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The regulatory content of intergenic DNA shapes genome architecture

21 June 2018

1 reference

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Extensive gene traffic on the mammalian X chromosome

21 June 2018

1 reference

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Effects of recombination rate and gene density on transposable element distributions in Arabidopsis thaliana

21 June 2018

1 reference

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Molecular paleontology of transposable elements in the Drosophila melanogaster genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Retroposed new genes out of the X in Drosophila

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Retroelement distributions in the human genome: variations associated with age and proximity to genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Evidence for large domains of similarly expressed genes in the Drosophila genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Selection for short introns in highly expressed genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Timing and targeting of P-element local transposition in the male germline cells of Drosophila melanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Recombination rate and the distribution of transposable elements in the Drosophila melanogaster genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Interactions between natural selection, recombination and gene density in the genes of Drosophila.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

The human transcriptome map: clustering of highly expressed genes in chromosomal domains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Transposons but not retrotransposons are located preferentially in regions of high recombination rate in Caenorhabditis elegans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Insertion site preferences of the P transposable element in Drosophila melanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Evidence for DNA Loss as a Determinant of Genome Size

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Chromosomal distribution of transposable elements in Drosophila melanogaster: test of the ectopic recombination model for maintenance of insertion site number

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

On the effective size of populations with separate sexes, with particular reference to sex-linked genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

The population genetics of Drosophila transposable elements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Preferential insertion of P elements into genes expressed in the germ-line of Drosophila melanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Chromosome rearrangement by ectopic recombination in Drosophila melanogaster: genome structure and evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Intron size in mammals: complexity comes to terms with economy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Fast protein evolution and germ line expression of a Drosophila parental gene and its young retroposed paralog

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Adaptation shapes patterns of genome evolution on sexual and asexual chromosomes in Drosophila

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Patterns of Hermes transposition in Drosophila melanogaster.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Modification of heat-shock gene expression in Drosophila melanogaster populations via transposable elements.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Patterns of insertion and deletion in contrasting chromatin domains.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

On the abundance and distribution of transposable elements in the genome of Drosophila melanogaster.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Contrasting patterns of X-linked and autosomal nucleotide variation in Drosophila melanogaster and Drosophila simulans.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Intron-genome size relationship on a large evolutionary scale

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Doc and copia instability in an isogenic Drosophila melanogaster stock.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2098804

Dynamics of the hobo transposable element in transgenic lines of Drosophila melanogaster

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18081425

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Pseudogene evolution in Drosophila suggests a high rate of DNA loss

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18081425

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.0030210

1 reference

25 July 2017

1 reference

25 July 2017

1 reference