(Q28255878)

English

Pathways to the analysis of microarray data

scientific article

In more languages

default for all languages

No label defined

No description defined

edit

Statements

0 references

1 reference

Europe PubMed Central

title

Pathways to the analysis of microarray data (English)

0 references

Matej Oresic

0 references

Antonio Vidal-Puig

0 references

R Keira Curtis

0 references

language of work or name

English

0 references

publication date

August 2005

0 references

published in

Trends in Biotechnology

0 references

volume

0 references

issue

0 references

page(s)

429-35

0 references

cites work

GoMiner: a resource for biological interpretation of genomic and proteomic data

1 reference

24 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1186/GB-2003-4-4-R28

Data exploration tools for the Gene Ontology database

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Using text analysis to identify functionally coherent gene groups

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Systematic determination of genetic network architecture

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Statistical concerns about the GSEA procedure

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Gene-Ontology-based clustering of gene expression data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

ChipInfo: Software for extracting gene annotation and gene ontology information for microarray analysis

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

The Stanford Microarray Database: data access and quality assessment tools

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Erralpha and Gabpa/b specify PGC-1alpha-dependent oxidative phosphorylation gene expression that is altered in diabetic muscle

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Analysis of variance for gene expression microarray data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Empirical bayes methods and false discovery rates for microarrays

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

The KEGG resource for deciphering the genome

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Handling multiple testing while interpreting microarrays with the Gene Ontology Database

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

GEPAS: A web-based resource for microarray gene expression data analysis

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Global functional profiling of gene expression.

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

NetAffx Gene Ontology Mining Tool: a visual approach for microarray data analysis

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

GOstat: find statistically overrepresented Gene Ontologies within a group of genes

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Exploring the new world of the genome with DNA microarrays

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

A concise guide to cDNA microarray analysis

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

PathMAPA: a tool for displaying gene expression and performing statistical tests on metabolic pathways at multiple levels for Arabidopsis

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Statistical intelligence: effective analysis of high-density microarray data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Normalization of cDNA microarray data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Forensic genetics and ethical, legal and social implications beyond the clinic

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Pathway Miner: extracting gene association networks from molecular pathways for predicting the biological significance of gene expression microarray data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Principal components analysis to summarize microarray experiments: application to sporulation time series

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

The Gene Ontology (GO) database and informatics resource

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Significance analysis of microarrays applied to the ionizing radiation response

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Pathway Processor: a tool for integrating whole-genome expression results into metabolic networks

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

ArrayExpress--a public repository for microarray gene expression data at the EBI

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Integrative analysis of multiple gene expression profiles applied to liver cancer study

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Experimental design for gene expression microarrays

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Statistical significance for genomewide studies

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Assessing gene significance from cDNA microarray expression data via mixed models

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Analysis of gene expression data using self-organizing maps

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

CLENCH: a program for calculating Cluster ENriCHment using the Gene Ontology

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Cluster analysis and display of genome-wide expression patterns

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

FunSpec: a web-based cluster interpreter for yeast

1 reference

27 August 2024

https://opencitations.net/index/api/v1/references/10.1016/J.TIBTECH.2005.05.011

Identifiers

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q28255878&oldid=2237677910"